AAL22350 (STM3488, hofQ)


Aliases : STM3488, hofQ

Description : putative transport protein [Ensembl]. Bacterial type II and III secretion system protein, Bacterial type II/III secretion system short domain [Interproscan].


Gene families : OG_02_0001437 (OrthoFinder) Phylogenetic Tree(s): OG0001437_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL22350
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AAC76416 hofQ, b3391 DNA catabolic putative fimbrial transporter [Ensembl].... 0.12 OrthoFinder
AGT22205 N559_0392, HofQ outer membrane porin HofQ [Ensembl]. Bacterial type... 0.08 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0009306 protein secretion IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0008645 hexose transmembrane transport IEP Enrichment
MF GO:0008740 L-rhamnose isomerase activity IEP Enrichment
BP GO:0009297 pilus assembly IEP Enrichment
MF GO:0015149 hexose transmembrane transporter activity IEP Enrichment
MF GO:0015153 rhamnose transmembrane transporter activity IEP Enrichment
MF GO:0015159 polysaccharide transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015288 porin activity IEP Enrichment
MF GO:0015473 fimbrial usher porin activity IEP Enrichment
BP GO:0015774 polysaccharide transport IEP Enrichment
BP GO:0019299 rhamnose metabolic process IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022829 wide pore channel activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0022884 macromolecule transmembrane transporter activity IEP Enrichment
BP GO:0030030 cell projection organization IEP Enrichment
BP GO:0030031 cell projection assembly IEP Enrichment
BP GO:0043711 pilus organization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR005644 NolW-like 120 180
IPR004846 T2SS/T3SS 250 409
No external refs found!