AAL22350 (STM3488, hofQ)

Aliases : STM3488, hofQ

Description : putative transport protein [Ensembl]. Bacterial type II and III secretion system protein, Bacterial type II/III secretion system short domain [Interproscan].

Gene families : OG_02_0001437 (OrthoFinder) Phylogenetic Tree(s): OG0001437_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AAL22350
Cluster	HCCA: Cluster_9

Target	Alias	Description	ECC score	Gene Family Method	Actions
AAC76416	hofQ, b3391	DNA catabolic putative fimbrial transporter [Ensembl]....	0.12	OrthoFinder
AGT22205	N559_0392, HofQ	outer membrane porin HofQ [Ensembl]. Bacterial type...	0.08	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0006810	transport	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009306	protein secretion	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0032940	secretion by cell	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0035592	establishment of protein localization to extracellular region	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046903	secretion	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0071692	protein localization to extracellular region	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0140352	export from cell	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005215	transporter activity	IEP	Enrichment
BP	GO:0005975	carbohydrate metabolic process	IEP	Enrichment
BP	GO:0008645	hexose transmembrane transport	IEP	Enrichment
MF	GO:0008740	L-rhamnose isomerase activity	IEP	Enrichment
BP	GO:0009297	pilus assembly	IEP	Enrichment
MF	GO:0015149	hexose transmembrane transporter activity	IEP	Enrichment
MF	GO:0015153	rhamnose transmembrane transporter activity	IEP	Enrichment
MF	GO:0015159	polysaccharide transmembrane transporter activity	IEP	Enrichment
MF	GO:0015267	channel activity	IEP	Enrichment
MF	GO:0015288	porin activity	IEP	Enrichment
MF	GO:0015473	fimbrial usher porin activity	IEP	Enrichment
BP	GO:0015774	polysaccharide transport	IEP	Enrichment
BP	GO:0019299	rhamnose metabolic process	IEP	Enrichment
BP	GO:0022607	cellular component assembly	IEP	Enrichment
MF	GO:0022803	passive transmembrane transporter activity	IEP	Enrichment
MF	GO:0022829	wide pore channel activity	IEP	Enrichment
MF	GO:0022857	transmembrane transporter activity	IEP	Enrichment
MF	GO:0022884	macromolecule transmembrane transporter activity	IEP	Enrichment
BP	GO:0030030	cell projection organization	IEP	Enrichment
BP	GO:0030031	cell projection assembly	IEP	Enrichment
BP	GO:0043711	pilus organization	IEP	Enrichment
BP	GO:0055085	transmembrane transport	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR005644	NolW-like	120	180
IPR004846	T2SS/T3SS	250	409

External Links

No external refs found!

AAL22350 (STM3488, hofQ)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation