- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : STM3492, yrfD
Description : putative periplasmic protein [Ensembl].
Gene families : OG_02_0003640 (OrthoFinder) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AAL22354 | |
| Cluster | HCCA: Cluster_36 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AAC76420 | hofM, b3395 | DNA catabolic putative pilus assembly protein [Ensembl]. | 0.15 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003909 | DNA ligase activity | IEP | Enrichment |
| MF | GO:0003911 | DNA ligase (NAD+) activity | IEP | Enrichment |
| MF | GO:0004347 | glucose-6-phosphate isomerase activity | IEP | Enrichment |
| MF | GO:0005215 | transporter activity | IEP | Enrichment |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | Enrichment |
| BP | GO:0005976 | polysaccharide metabolic process | IEP | Enrichment |
| BP | GO:0005996 | monosaccharide metabolic process | IEP | Enrichment |
| MF | GO:0008740 | L-rhamnose isomerase activity | IEP | Enrichment |
| BP | GO:0009297 | pilus assembly | IEP | Enrichment |
| MF | GO:0015473 | fimbrial usher porin activity | IEP | Enrichment |
| BP | GO:0016043 | cellular component organization | IEP | Enrichment |
| MF | GO:0016860 | intramolecular oxidoreductase activity | IEP | Enrichment |
| MF | GO:0016861 | intramolecular oxidoreductase activity, interconverting aldoses and ketoses | IEP | Enrichment |
| BP | GO:0019299 | rhamnose metabolic process | IEP | Enrichment |
| BP | GO:0019318 | hexose metabolic process | IEP | Enrichment |
| MF | GO:0022857 | transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0030030 | cell projection organization | IEP | Enrichment |
| BP | GO:0030031 | cell projection assembly | IEP | Enrichment |
| CC | GO:0030288 | outer membrane-bounded periplasmic space | IEP | Enrichment |
| CC | GO:0042597 | periplasmic space | IEP | Enrichment |
| BP | GO:0043711 | pilus organization | IEP | Enrichment |
| BP | GO:0045229 | external encapsulating structure organization | IEP | Enrichment |
| BP | GO:0071554 | cell wall organization or biogenesis | IEP | Enrichment |
| BP | GO:0071555 | cell wall organization | IEP | Enrichment |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Enrichment |
No InterPro domains available for this sequence
| No external refs found! |