AAL22422 (STM3562, livM)

Aliases : STM3562, livM

Description : high-affinity branched-chain amino acid transporter [Ensembl]. Domain of unknown function (DUF3382), Branched-chain amino acid transport system / permease component [Interproscan].

Gene families : OG_02_0001160 (OrthoFinder) Phylogenetic Tree(s): OG0001160_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AAL22422
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AAC76481 livM, b3456 branched-chain amino acid ABC transporter permease... 0.07 OrthoFinder
AAK99465 spr0661, livM ABC transporter membrane-spanning permease-branched... 0.05 OrthoFinder
AGT22154 N559_0336 leucine/isoleucine/valine transporter permease subunit [Ensembl]. 0.06 OrthoFinder
AGT23713 N559_1985 high-affinity branched-chain amino acid transport [Ensembl]. 0.04 OrthoFinder
CRO53305 No alias leucine/isoleucine/valine transporter permease subunit... 0.08 OrthoFinder
CRP80420 No alias leucine/isoleucine/valine transporter permease subunit... 0.08 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0008417 fucosyltransferase activity IEP Enrichment
BP GO:0009246 enterobacterial common antigen biosynthetic process IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Enrichment
BP GO:0036065 fucosylation IEP Enrichment
BP GO:0044264 cellular polysaccharide metabolic process IEP Enrichment
BP GO:0046378 enterobacterial common antigen metabolic process IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
InterPro domains Description Start Stop
IPR001851 ABC_transp_permease 113 398
IPR021807 LivHM_N 6 103
No external refs found!