AAL22422 (STM3562, livM)

Aliases : STM3562, livM

Description : high-affinity branched-chain amino acid transporter [Ensembl]. Domain of unknown function (DUF3382), Branched-chain amino acid transport system / permease component [Interproscan].

Gene families : OG_02_0001160 (OrthoFinder) Phylogenetic Tree(s): OG0001160_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AAL22422
Cluster	HCCA: Cluster_2

Target	Alias	Description	ECC score	Gene Family Method
AAC76481	livM, b3456	branched-chain amino acid ABC transporter permease...	0.07	OrthoFinder
AAK99465	spr0661, livM	ABC transporter membrane-spanning permease-branched...	0.05	OrthoFinder
AGT22154	N559_0336	leucine/isoleucine/valine transporter permease subunit [Ensembl].	0.06	OrthoFinder
AGT23713	N559_1985	high-affinity branched-chain amino acid transport [Ensembl].	0.04	OrthoFinder
CRO53305	No alias	leucine/isoleucine/valine transporter permease subunit...	0.08	OrthoFinder
CRP80420	No alias	leucine/isoleucine/valine transporter permease subunit...	0.08	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016021	integral component of membrane	IEA	Interproscan
MF	GO:0022857	transmembrane transporter activity	IEA	Interproscan
CC	GO:0031224	intrinsic component of membrane	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0008417	fucosyltransferase activity	IEP	Enrichment
BP	GO:0009246	enterobacterial common antigen biosynthetic process	IEP	Enrichment
CC	GO:0016020	membrane	IEP	Enrichment
MF	GO:0016758	hexosyltransferase activity	IEP	Enrichment
MF	GO:0016887	ATPase	IEP	Enrichment
BP	GO:0033692	cellular polysaccharide biosynthetic process	IEP	Enrichment
BP	GO:0036065	fucosylation	IEP	Enrichment
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	Enrichment
BP	GO:0046378	enterobacterial common antigen metabolic process	IEP	Enrichment
MF	GO:0046983	protein dimerization activity	IEP	Enrichment
BP	GO:0070085	glycosylation	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001851	ABC_transp_permease	113	398
IPR021807	LivHM_N	6	103

External Links

No external refs found!

AAL22422 (STM3562, livM)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation