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Aliases : def, BN171_2830014
Description : Peptide deformylase 2 (PDF 2) (Polypeptide deformylase 2 ) [Ensembl]. Polypeptide deformylase [Interproscan].
Gene families : OG_02_0000189 (OrthoFinder) Phylogenetic Tree(s): OG0000189_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: CCL19046 | |
| Cluster | HCCA: Cluster_26 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| EDJ89955 | CGSHi22421_05742 | hypothetical protein [Ensembl]. Polypeptide deformylase... | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003697 | single-stranded DNA binding | IEP | Enrichment |
| MF | GO:0004127 | cytidylate kinase activity | IEP | Enrichment |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Enrichment |
| BP | GO:0006081 | cellular aldehyde metabolic process | IEP | Enrichment |
| BP | GO:0006090 | pyruvate metabolic process | IEP | Enrichment |
| BP | GO:0006260 | DNA replication | IEP | Enrichment |
| BP | GO:0006364 | rRNA processing | IEP | Enrichment |
| MF | GO:0008408 | 3'-5' exonuclease activity | IEP | Enrichment |
| MF | GO:0008837 | diaminopimelate epimerase activity | IEP | Enrichment |
| BP | GO:0009240 | isopentenyl diphosphate biosynthetic process | IEP | Enrichment |
| BP | GO:0016072 | rRNA metabolic process | IEP | Enrichment |
| MF | GO:0016776 | phosphotransferase activity, phosphate group as acceptor | IEP | Enrichment |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | Enrichment |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Enrichment |
| MF | GO:0016854 | racemase and epimerase activity | IEP | Enrichment |
| MF | GO:0016855 | racemase and epimerase activity, acting on amino acids and derivatives | IEP | Enrichment |
| MF | GO:0019205 | nucleobase-containing compound kinase activity | IEP | Enrichment |
| BP | GO:0019288 | isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | IEP | Enrichment |
| BP | GO:0019682 | glyceraldehyde-3-phosphate metabolic process | IEP | Enrichment |
| MF | GO:0030983 | mismatched DNA binding | IEP | Enrichment |
| MF | GO:0036361 | racemase activity, acting on amino acids and derivatives | IEP | Enrichment |
| BP | GO:0046490 | isopentenyl diphosphate metabolic process | IEP | Enrichment |
| MF | GO:0047661 | amino-acid racemase activity | IEP | Enrichment |
| MF | GO:0050145 | nucleoside monophosphate kinase activity | IEP | Enrichment |
| BP | GO:0050992 | dimethylallyl diphosphate biosynthetic process | IEP | Enrichment |
| BP | GO:0050993 | dimethylallyl diphosphate metabolic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR023635 | Peptide_deformylase | 4 | 146 |
| UniProtKB | U3WYA6 |