Aliases : STM3672, yiaN
Description : putative DedA family, membrane protein [Ensembl]. Tripartite ATP-independent periplasmic transporter [Interproscan].
Gene families : OG_02_0000769 (OrthoFinder) Phylogenetic Tree(s): OG0000769_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AAL22531 | |
Cluster | HCCA: Cluster_36 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AAT48194 | yiaN, b3578 | 2,3-diketo-L-gulonate TRAP transporter large permease... | 0.1 | OrthoFinder | |
AEA93004 | dctM, OG1RF_10317 | TRAP-T family tripartite ATP-independent periplasmic... | 0.03 | OrthoFinder | |
CRN71084 | siaT_1 | Neu5Ac permease [Ensembl]. Tripartite ATP-independent... | 0.03 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003909 | DNA ligase activity | IEP | Enrichment |
MF | GO:0003911 | DNA ligase (NAD+) activity | IEP | Enrichment |
MF | GO:0005215 | transporter activity | IEP | Enrichment |
BP | GO:0005975 | carbohydrate metabolic process | IEP | Enrichment |
BP | GO:0006810 | transport | IEP | Enrichment |
BP | GO:0006814 | sodium ion transport | IEP | Enrichment |
BP | GO:0008645 | hexose transmembrane transport | IEP | Enrichment |
MF | GO:0008740 | L-rhamnose isomerase activity | IEP | Enrichment |
BP | GO:0009297 | pilus assembly | IEP | Enrichment |
MF | GO:0015149 | hexose transmembrane transporter activity | IEP | Enrichment |
MF | GO:0015153 | rhamnose transmembrane transporter activity | IEP | Enrichment |
MF | GO:0015473 | fimbrial usher porin activity | IEP | Enrichment |
BP | GO:0019299 | rhamnose metabolic process | IEP | Enrichment |
MF | GO:0022857 | transmembrane transporter activity | IEP | Enrichment |
BP | GO:0030030 | cell projection organization | IEP | Enrichment |
BP | GO:0030031 | cell projection assembly | IEP | Enrichment |
CC | GO:0030288 | outer membrane-bounded periplasmic space | IEP | Enrichment |
BP | GO:0043711 | pilus organization | IEP | Enrichment |
BP | GO:0045229 | external encapsulating structure organization | IEP | Enrichment |
BP | GO:0051179 | localization | IEP | Enrichment |
BP | GO:0051234 | establishment of localization | IEP | Enrichment |
BP | GO:0055085 | transmembrane transport | IEP | Enrichment |
BP | GO:0071554 | cell wall organization or biogenesis | IEP | Enrichment |
BP | GO:0071555 | cell wall organization | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR010656 | DctM | 7 | 416 |
No external refs found! |