AAL22660 (STM3800, dsdC)

Aliases : STM3800, dsdC

Description : LysR family transcriptional activator [Ensembl]. LysR substrate binding domain, Bacterial regulatory helix-turn-helix protein [Interproscan].

Gene families : OG_02_0000139 (OrthoFinder) Phylogenetic Tree(s): OG0000139_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AAL22660
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
AAC75850 gcvA, b2808 glycine cleavage system transcriptional activator;... 0.06 OrthoFinder
AGT23542 N559_1808 LysR family transcriptional regulator [Ensembl]. LysR... 0.01 OrthoFinder
AGT25159 N559_3511, LysR transcriptional regulator LysR [Ensembl]. LysR substrate... 0.01 OrthoFinder
KNA56287 VCV51_030605 LysR substrate binding domain-containing protein... 0.02 OrthoFinder
KNA56897 VCV51_030532 LysR substrate binding domain-containing protein... 0.01 OrthoFinder
KNA60005 VCV51_032417 D-serine deaminase transcriptional activator [Ensembl].... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000156 phosphorelay response regulator activity IEP Enrichment
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
MF GO:0060089 molecular transducer activity IEP Enrichment
InterPro domains Description Start Stop
IPR000847 Tscrpt_reg_HTH_LysR 18 76
IPR005119 LysR_subst-bd 99 306
No external refs found!