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AAL22741 (STM3883, rbsC)


Aliases : STM3883, rbsC

Description : D-ribose high-affinity transport protein (1st module, ATP-binding subunit) [Ensembl]. Branched-chain amino acid transport system / permease component [Interproscan].


Gene families : OG_02_0000052 (OrthoFinder) Phylogenetic Tree(s): OG0000052_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL22741
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AAC75209 mglC, b2148 methyl-galactoside transporter subunit [Ensembl].... 0.05 OrthoFinder
AAC76773 rbsC, b3750 D-ribose ABC transporter permease [Ensembl].... 0.06 OrthoFinder
AAC77047 alsC, b4086 D-allose ABC transporter permease [Ensembl].... 0.03 OrthoFinder
AGT22039 N559_0217 D-xylose transport permease ABC transporter membrane... 0.03 OrthoFinder
AGT25371 N559_3733 sugar ABC transporter permease [Ensembl]. 0.04 OrthoFinder
AGT25473 N559_3837 sugar ABC transport system permease component [Ensembl]. 0.03 OrthoFinder
AGT26697 N559_5123 ribose ABC transporter permease protein [Ensembl]. 0.07 OrthoFinder
CRN86499 rbsC Ribose transport system permease protein RbsC [Ensembl].... 0.04 OrthoFinder
KNA60662 VCV51_032101 branched-chain amino acid transport system/permease... 0.06 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006276 plasmid maintenance IEP Enrichment
BP GO:0006304 DNA modification IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
MF GO:0008830 dTDP-4-dehydrorhamnose 3,5-epimerase activity IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
MF GO:0048029 monosaccharide binding IEP Enrichment
InterPro domains Description Start Stop
IPR001851 ABC_transp_permease 45 313
No external refs found!