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  5. AAL22742

AAL22742 (STM3884, rbsB)


Aliases : STM3884, rbsB

Description : D-ribose transport protein [Ensembl]. Periplasmic binding protein domain [Interproscan].


Gene families : OG_02_0000754 (OrthoFinder) Phylogenetic Tree(s): OG0000754_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL22742
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AAC76774 rbsB, b3751 D-ribose ABC transporter periplasmic binding protein;... 0.12 OrthoFinder
AAC77049 alsB, b4088 D-allose ABC transporter periplasmic binding protein... 0.04 OrthoFinder
AGT23754 N559_2032 putative rhizopine uptake ABC transport system... 0.03 OrthoFinder
AGT24254 N559_2574 putative ABC transporter, nucleotide binding/ATPase... 0.05 OrthoFinder
AGT25368 N559_3730 periplasmic binding protein/LacI transcriptional... 0.05 OrthoFinder
AGT25475 N559_3839 putative periplasmic binding protein [Ensembl].... 0.03 OrthoFinder
AGT26397 N559_4807 D-ribose periplasmic binding protein [Ensembl].... 0.06 OrthoFinder
AGT26696 N559_5122, RbsB D-ribose transporter subunit RbsB [Ensembl]. Periplasmic... 0.12 OrthoFinder
CCL17793 BN171_1800016 ABC-type transport system, sugar-family extracellular... 0.03 OrthoFinder
CCL18506 rbsB, BN171_240011 ABC-type transport system, ribose-specific extracellular... 0.06 OrthoFinder
CRN86559 rbsB D-ribose-binding periplasmic protein precursor... 0.08 OrthoFinder
KNA60661 VCV51_032100 ribose transport system substrate-binding protein... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003941 L-serine ammonia-lyase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005337 nucleoside transmembrane transporter activity IEP Enrichment
MF GO:0005351 carbohydrate:proton symporter activity IEP Enrichment
MF GO:0005402 carbohydrate:cation symporter activity IEP Enrichment
BP GO:0005996 monosaccharide metabolic process IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006873 cellular ion homeostasis IEP Enrichment
BP GO:0006875 cellular metal ion homeostasis IEP Enrichment
BP GO:0006879 cellular iron ion homeostasis IEP Enrichment
BP GO:0007154 cell communication IEP Enrichment
MF GO:0008028 monocarboxylic acid transmembrane transporter activity IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008199 ferric iron binding IEP Enrichment
BP GO:0009116 nucleoside metabolic process IEP Enrichment
BP GO:0009166 nucleotide catabolic process IEP Enrichment
BP GO:0009267 cellular response to starvation IEP Enrichment
CC GO:0009279 cell outer membrane IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0009991 response to extracellular stimulus IEP Enrichment
MF GO:0015144 carbohydrate transmembrane transporter activity IEP Enrichment
MF GO:0015145 monosaccharide transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015288 porin activity IEP Enrichment
MF GO:0015294 solute:cation symporter activity IEP Enrichment
MF GO:0015295 solute:proton symporter activity IEP Enrichment
MF GO:0015355 secondary active monocarboxylate transmembrane transporter activity IEP Enrichment
MF GO:0015649 2-keto-3-deoxygluconate:proton symporter activity IEP Enrichment
BP GO:0015749 monosaccharide transmembrane transport IEP Enrichment
BP GO:0015858 nucleoside transport IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022829 wide pore channel activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
BP GO:0030003 cellular cation homeostasis IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
BP GO:0031667 response to nutrient levels IEP Enrichment
BP GO:0031668 cellular response to extracellular stimulus IEP Enrichment
BP GO:0031669 cellular response to nutrient levels IEP Enrichment
BP GO:0034219 carbohydrate transmembrane transport IEP Enrichment
BP GO:0034220 ion transmembrane transport IEP Enrichment
BP GO:0042594 response to starvation IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0046411 2-keto-3-deoxygluconate transmembrane transport IEP Enrichment
BP GO:0046916 cellular transition metal ion homeostasis IEP Enrichment
MF GO:0048029 monosaccharide binding IEP Enrichment
BP GO:0048878 chemical homeostasis IEP Enrichment
BP GO:0050801 ion homeostasis IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
MF GO:0051119 sugar transmembrane transporter activity IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051262 protein tetramerization IEP Enrichment
BP GO:0055065 metal ion homeostasis IEP Enrichment
BP GO:0055072 iron ion homeostasis IEP Enrichment
BP GO:0055076 transition metal ion homeostasis IEP Enrichment
BP GO:0055080 cation homeostasis IEP Enrichment
BP GO:0055082 cellular chemical homeostasis IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
BP GO:0071496 cellular response to external stimulus IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0098771 inorganic ion homeostasis IEP Enrichment
BP GO:1901264 carbohydrate derivative transport IEP Enrichment
BP GO:1901292 nucleoside phosphate catabolic process IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment
BP GO:1901657 glycosyl compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR025997 SBP_2_dom 29 281
No external refs found!