AAL22886 (STM4046, rhaA)

Aliases : STM4046, rhaA

Description : L-rhamnose isomerase [Ensembl]. L-rhamnose isomerase (RhaA) [Interproscan].

Gene families : OG_02_0001834 (OrthoFinder) Phylogenetic Tree(s): OG0001834_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AAL22886
Cluster	HCCA: Cluster_36

Target	Alias	Description	ECC score	Gene Family Method
AAT48234	rhaA, b3903	L-rhamnose isomerase [Ensembl]. L-rhamnose isomerase...	0.14	OrthoFinder
AEA93007	rhaA, OG1RF_10320	L-rhamnose isomerase [Ensembl]. L-rhamnose isomerase...	0.03	OrthoFinder
AGT26644	N559_5067	L-rhamnose isomerase [Ensembl].	0.07	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005996	monosaccharide metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008740	L-rhamnose isomerase activity	IEA	Interproscan
MF	GO:0016853	isomerase activity	None	Extended
MF	GO:0016860	intramolecular oxidoreductase activity	None	Extended
MF	GO:0016861	intramolecular oxidoreductase activity, interconverting aldoses and ketoses	None	Extended
BP	GO:0019299	rhamnose metabolic process	IEA	Interproscan
BP	GO:0019318	hexose metabolic process	None	Extended
MF	GO:0030145	manganese ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003909	DNA ligase activity	IEP	Enrichment
MF	GO:0003911	DNA ligase (NAD+) activity	IEP	Enrichment
MF	GO:0005215	transporter activity	IEP	Enrichment
BP	GO:0006810	transport	IEP	Enrichment
BP	GO:0007155	cell adhesion	IEP	Enrichment
BP	GO:0008645	hexose transmembrane transport	IEP	Enrichment
CC	GO:0009289	pilus	IEP	Enrichment
BP	GO:0009297	pilus assembly	IEP	Enrichment
MF	GO:0015149	hexose transmembrane transporter activity	IEP	Enrichment
MF	GO:0015153	rhamnose transmembrane transporter activity	IEP	Enrichment
MF	GO:0015159	polysaccharide transmembrane transporter activity	IEP	Enrichment
MF	GO:0015473	fimbrial usher porin activity	IEP	Enrichment
BP	GO:0015774	polysaccharide transport	IEP	Enrichment
BP	GO:0022610	biological adhesion	IEP	Enrichment
MF	GO:0022857	transmembrane transporter activity	IEP	Enrichment
MF	GO:0022884	macromolecule transmembrane transporter activity	IEP	Enrichment
BP	GO:0030030	cell projection organization	IEP	Enrichment
BP	GO:0030031	cell projection assembly	IEP	Enrichment
CC	GO:0042995	cell projection	IEP	Enrichment
BP	GO:0043711	pilus organization	IEP	Enrichment
BP	GO:0051179	localization	IEP	Enrichment
BP	GO:0051234	establishment of localization	IEP	Enrichment
BP	GO:0055085	transmembrane transport	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR009308	Rhamnose_isomerase	3	418

External Links

No external refs found!