AAL22916 (STM4076, ydeZ)

Aliases : STM4076, ydeZ

Description : putative sugar transport protein [Ensembl]. Branched-chain amino acid transport system / permease component [Interproscan].

Gene families : OG_02_0000052 (OrthoFinder) Phylogenetic Tree(s): OG0000052_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AAL22916
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AAC74587 lsrC, b1514 autoinducer 2 import system permease protein [Ensembl].... 0.1 OrthoFinder
AAC74588 lsrD, b1515 autoinducer 2 import system permease protein [Ensembl].... 0.1 OrthoFinder
AAT48138 araH, b4460 L-arabinose ABC transporter permease [Ensembl].... 0.06 OrthoFinder
AGT22461 N559_0665, LsrC autoinducer 2 ABC transporter, permease protein LsrC [Ensembl]. 0.07 OrthoFinder
AGT22462 N559_0666 putative transport system permease component [Ensembl]. 0.07 OrthoFinder
AGT25473 N559_3837 sugar ABC transport system permease component [Ensembl]. 0.11 OrthoFinder
AGT26146 N559_4543 ribose high-affinity ABC transporter permease component... 0.05 OrthoFinder
AGT26147 N559_4544 ribose high-affinity ABC transporter permease component... 0.03 OrthoFinder
AGT26396 N559_4806 putative carbohydrate ABC transport system permease [Ensembl]. 0.03 OrthoFinder
AGT26648 N559_5071 putative inner-membrane translocator [Ensembl]. 0.03 OrthoFinder
AGT26649 N559_5072 rhamnose ABC transport system permease component [Ensembl]. 0.04 OrthoFinder
AGT26697 N559_5123 ribose ABC transporter permease protein [Ensembl]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0008643 carbohydrate transport IEP Enrichment
MF GO:0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity IEP Enrichment
BP GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system IEP Enrichment
MF GO:0015144 carbohydrate transmembrane transporter activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
InterPro domains Description Start Stop
IPR001851 ABC_transp_permease 39 308
No external refs found!