AAL22967 (STM4129, trmA)


Aliases : STM4129, trmA

Description : tRNA (uracil-5-)-methyltransferase [Ensembl]. tRNA (Uracil-5-)-methyltransferase [Interproscan].


Gene families : OG_02_0001291 (OrthoFinder) Phylogenetic Tree(s): OG0001291_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL22967
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AGT26602 N559_5025 tRNA (uracil-5-)-methyltransferase [Ensembl].... 0.06 OrthoFinder
AKP14393 trmA, WX61_00310 tRNA/tmRNA (uracil-C(5))-methyltransferase [Ensembl].... 0.03 OrthoFinder
EDJ91428 CGSHi22421_04973 tRNA (uracil-5-)-methyltransferase [Ensembl]. tRNA... 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006396 RNA processing IEA Interproscan
MF GO:0008173 RNA methyltransferase activity IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP Enrichment
BP GO:0002100 tRNA wobble adenosine to inosine editing IEP Enrichment
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003911 DNA ligase (NAD+) activity IEP Enrichment
MF GO:0004000 adenosine deaminase activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
BP GO:0006382 adenosine to inosine editing IEP Enrichment
MF GO:0008144 drug binding IEP Enrichment
MF GO:0008251 tRNA-specific adenosine deaminase activity IEP Enrichment
MF GO:0008658 penicillin binding IEP Enrichment
MF GO:0015099 nickel cation transmembrane transporter activity IEP Enrichment
BP GO:0015675 nickel cation transport IEP Enrichment
BP GO:0016311 dephosphorylation IEP Enrichment
BP GO:0016553 base conversion or substitution editing IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Enrichment
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
MF GO:0019239 deaminase activity IEP Enrichment
MF GO:0030151 molybdenum ion binding IEP Enrichment
MF GO:0031406 carboxylic acid binding IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
MF GO:0033293 monocarboxylic acid binding IEP Enrichment
BP GO:0035444 nickel cation transmembrane transport IEP Enrichment
MF GO:0043177 organic acid binding IEP Enrichment
MF GO:0050380 undecaprenyl-diphosphatase activity IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR010280 U5_MeTrfase_fam 10 365
No external refs found!