CCL19099 (BN171_2870029)

Aliases : BN171_2870029

Description : Two-component response regulator [Ensembl]. Response regulator receiver domain, Transcriptional regulatory protein [Interproscan].

Gene families : OG_02_0000001 (OrthoFinder) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CCL19099
Cluster	HCCA: Cluster_32

Target	Alias	Description	ECC score	Gene Family Method
AAC76061	qseB, b3025	quorum sensing DNA-binding response regulator in...	0.02	OrthoFinder
CPC31435	arlR, ERS093114_00002	Putative response regulator ArlR [Ensembl]....	0.03	OrthoFinder
CPC70217	vicR, ERS093114_01104	Two-component response regulator [Ensembl]....	0.02	OrthoFinder
CRO52494	czcR_1	Transcriptional activator protein CzcR [Ensembl]....	0.02	OrthoFinder
CRO55563	arcA_1	Dye resistance protein [Ensembl]. Response regulator...	0.03	OrthoFinder
CRP18948	ompR_3	Transcriptional regulatory protein OmpR [Ensembl]....	0.02	OrthoFinder
CRP58313	czcR_4	Transcriptional activator protein CzcR [Ensembl]....	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000155	phosphorelay sensor kinase activity	IEP	Enrichment
MF	GO:0004066	asparagine synthase (glutamine-hydrolyzing) activity	IEP	Enrichment
MF	GO:0004175	endopeptidase activity	IEP	Enrichment
MF	GO:0004197	cysteine-type endopeptidase activity	IEP	Enrichment
MF	GO:0004672	protein kinase activity	IEP	Enrichment
MF	GO:0004673	protein histidine kinase activity	IEP	Enrichment
BP	GO:0006259	DNA metabolic process	IEP	Enrichment
BP	GO:0006310	DNA recombination	IEP	Enrichment
BP	GO:0006629	lipid metabolic process	IEP	Enrichment
MF	GO:0008233	peptidase activity	IEP	Enrichment
MF	GO:0008234	cysteine-type peptidase activity	IEP	Enrichment
BP	GO:0015074	DNA integration	IEP	Enrichment
MF	GO:0016301	kinase activity	IEP	Enrichment
MF	GO:0016740	transferase activity	IEP	Enrichment
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Enrichment
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Enrichment
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	IEP	Enrichment
BP	GO:0030258	lipid modification	IEP	Enrichment
BP	GO:0030259	lipid glycosylation	IEP	Enrichment
BP	GO:0044255	cellular lipid metabolic process	IEP	Enrichment
BP	GO:0070085	glycosylation	IEP	Enrichment
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Enrichment
MF	GO:0140299	small molecule sensor activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001867	OmpR/PhoB-type_DNA-bd	154	229
IPR001789	Sig_transdc_resp-reg_receiver	5	116

External Links

UniProtKB	U3X1S6

CCL19099 (BN171_2870029)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation