Aliases : STM4224, yjbG
Description : putative periplasmic protein [Ensembl]. Capsule biosynthesis GfcC [Interproscan].
Gene families : OG_02_0002805 (OrthoFinder) Phylogenetic Tree(s): OG0002805_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AAL23048 | |
Cluster | HCCA: Cluster_36 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AAC74070 | gfcC, b0985 | putative O-antigen capsule production periplasmic... | 0.03 | OrthoFinder | |
AAC76998 | yjbG, b4028 | extracellular polysaccharide export OMA protein... | 0.05 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003909 | DNA ligase activity | IEP | Enrichment |
MF | GO:0003911 | DNA ligase (NAD+) activity | IEP | Enrichment |
MF | GO:0004590 | orotidine-5'-phosphate decarboxylase activity | IEP | Enrichment |
MF | GO:0005215 | transporter activity | IEP | Enrichment |
BP | GO:0005976 | polysaccharide metabolic process | IEP | Enrichment |
BP | GO:0006206 | pyrimidine nucleobase metabolic process | IEP | Enrichment |
BP | GO:0006207 | 'de novo' pyrimidine nucleobase biosynthetic process | IEP | Enrichment |
BP | GO:0006810 | transport | IEP | Enrichment |
BP | GO:0006811 | ion transport | IEP | Enrichment |
BP | GO:0006812 | cation transport | IEP | Enrichment |
BP | GO:0006814 | sodium ion transport | IEP | Enrichment |
MF | GO:0008948 | oxaloacetate decarboxylase activity | IEP | Enrichment |
BP | GO:0009112 | nucleobase metabolic process | IEP | Enrichment |
BP | GO:0009297 | pilus assembly | IEP | Enrichment |
MF | GO:0015081 | sodium ion transmembrane transporter activity | IEP | Enrichment |
MF | GO:0015288 | porin activity | IEP | Enrichment |
MF | GO:0015473 | fimbrial usher porin activity | IEP | Enrichment |
CC | GO:0016020 | membrane | IEP | Enrichment |
BP | GO:0016043 | cellular component organization | IEP | Enrichment |
MF | GO:0016829 | lyase activity | IEP | Enrichment |
MF | GO:0016830 | carbon-carbon lyase activity | IEP | Enrichment |
MF | GO:0016831 | carboxy-lyase activity | IEP | Enrichment |
BP | GO:0019856 | pyrimidine nucleobase biosynthetic process | IEP | Enrichment |
BP | GO:0022607 | cellular component assembly | IEP | Enrichment |
MF | GO:0022829 | wide pore channel activity | IEP | Enrichment |
MF | GO:0022857 | transmembrane transporter activity | IEP | Enrichment |
BP | GO:0030001 | metal ion transport | IEP | Enrichment |
BP | GO:0030030 | cell projection organization | IEP | Enrichment |
BP | GO:0030031 | cell projection assembly | IEP | Enrichment |
BP | GO:0035725 | sodium ion transmembrane transport | IEP | Enrichment |
BP | GO:0036376 | sodium ion export across plasma membrane | IEP | Enrichment |
BP | GO:0043711 | pilus organization | IEP | Enrichment |
BP | GO:0046112 | nucleobase biosynthetic process | IEP | Enrichment |
MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | Enrichment |
BP | GO:0051179 | localization | IEP | Enrichment |
BP | GO:0051234 | establishment of localization | IEP | Enrichment |
BP | GO:0070839 | metal ion export | IEP | Enrichment |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | Enrichment |
BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | Enrichment |
BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | Enrichment |
BP | GO:0098655 | cation transmembrane transport | IEP | Enrichment |
BP | GO:0098660 | inorganic ion transmembrane transport | IEP | Enrichment |
BP | GO:0098662 | inorganic cation transmembrane transport | IEP | Enrichment |
BP | GO:0140115 | export across plasma membrane | IEP | Enrichment |
BP | GO:0140352 | export from cell | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR010425 | DUF1017 | 20 | 244 |
No external refs found! |