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AAL23207 (STM4387, sgaU)


Aliases : STM4387, sgaU

Description : putative hexulose-6-phosphate isomerase [Ensembl]. Xylose isomerase-like TIM barrel [Interproscan].


Gene families : OG_02_0001386 (OrthoFinder) Phylogenetic Tree(s): OG0001386_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL23207
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AAC77154 ulaE, b4197 L-xylulose 5-phosphate 3-epimerase [Ensembl]. Xylose... 0.08 OrthoFinder
AAL00648 spr1845, sga Hexulose-6-phosphate isomerase [Ensembl]. Xylose... 0.04 OrthoFinder
AEA93595 sgbU, OG1RF_10908 L-ribulose-5-phosphate 3-epimerase [Ensembl]. Xylose... 0.05 OrthoFinder
AGT26296 N559_4704 L-xylulose 5-phosphate 3-epimerase [Ensembl]. TIM barrel... 0.09 OrthoFinder
CCG26478 No alias L-xylulose 5-phosphate 3-epimerase [Ensembl]. Xylose... 0.05 OrthoFinder
KNA52269 VCV51_033435 hexulose-6-phosphate isomerase [Ensembl]. Xylose... 0.06 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0004590 orotidine-5'-phosphate decarboxylase activity IEP Enrichment
BP GO:0006206 pyrimidine nucleobase metabolic process IEP Enrichment
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0009112 nucleobase metabolic process IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
BP GO:0046112 nucleobase biosynthetic process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Enrichment
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR013022 Xyl_isomerase-like_TIM-brl 25 230
No external refs found!