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AAL23208 (STM4388, sgaE)


Aliases : STM4388, sgaE

Description : putative L-ribulose 5-phosphate 4-epimerase [Ensembl]. Class II Aldolase and Adducin N-terminal domain [Interproscan].


Gene families : OG_02_0000106 (OrthoFinder) Phylogenetic Tree(s): OG0000106_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL23208
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AAC76607 sgbE, b3583 L-ribulose-5-phosphate 4-epimerase [Ensembl]. Class II... 0.05 OrthoFinder
AAC77155 ulaF, b4198 L-ribulose 5-phosphate 4-epimerase [Ensembl]. Class II... 0.14 OrthoFinder
AAL00647 spr1844, araD L-ribulose 5-phosphate 4-epimerase [Ensembl]. Class II... 0.04 OrthoFinder
ADK86727 araD, MPNE_0581 L-ribulose-5-phosphate 4-epimerase [Ensembl]. Class II... 0.02 OrthoFinder
AEA93596 araD, OG1RF_10909 L-ribulose-5-phosphate 4-epimerase [Ensembl]. Class II... 0.06 OrthoFinder
AGT26295 N559_4703 L-ribulose-5-phosphate 4-epimerase [Ensembl]. Class II... 0.12 OrthoFinder
CCG26479 No alias L-ribulose-5-phosphate 4-epimerase [Ensembl]. Class II... 0.05 OrthoFinder
CCL20523 BN171_60014 Putative sugar-phosphate aldolase [Ensembl]. Class II... 0.09 OrthoFinder
KNA52272 VCV51_033438 class II Aldolase and Adducin domain-containing protein... 0.06 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004590 orotidine-5'-phosphate decarboxylase activity IEP Enrichment
BP GO:0006206 pyrimidine nucleobase metabolic process IEP Enrichment
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity IEP Enrichment
BP GO:0009112 nucleobase metabolic process IEP Enrichment
MF GO:0015144 carbohydrate transmembrane transporter activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP Enrichment
BP GO:0046112 nucleobase biosynthetic process IEP Enrichment
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Enrichment
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001303 Aldolase_II/adducin_N 7 193
No external refs found!