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Aliases : PSLT097, traF
Description : conjugative transfer: assembly [Ensembl]. F plasmid transfer operon protein [Interproscan].
Gene families : OG_02_0005037 (OrthoFinder) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AAL23500 | |
| Cluster | HCCA: Cluster_21 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AGT26938 | N559_5364, TraF | conjugal pilus assembly protein TraF [Ensembl]. | 0.12 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000270 | peptidoglycan metabolic process | IEP | Enrichment |
| BP | GO:0000746 | conjugation | IEP | Enrichment |
| MF | GO:0003796 | lysozyme activity | IEP | Enrichment |
| CC | GO:0005576 | extracellular region | IEP | Enrichment |
| BP | GO:0006022 | aminoglycan metabolic process | IEP | Enrichment |
| BP | GO:0006026 | aminoglycan catabolic process | IEP | Enrichment |
| BP | GO:0006027 | glycosaminoglycan catabolic process | IEP | Enrichment |
| BP | GO:0006259 | DNA metabolic process | IEP | Enrichment |
| BP | GO:0006281 | DNA repair | IEP | Enrichment |
| BP | GO:0006814 | sodium ion transport | IEP | Enrichment |
| MF | GO:0008948 | oxaloacetate decarboxylase activity | IEP | Enrichment |
| BP | GO:0009057 | macromolecule catabolic process | IEP | Enrichment |
| BP | GO:0009253 | peptidoglycan catabolic process | IEP | Enrichment |
| BP | GO:0016998 | cell wall macromolecule catabolic process | IEP | Enrichment |
| BP | GO:0030203 | glycosaminoglycan metabolic process | IEP | Enrichment |
| BP | GO:0035725 | sodium ion transmembrane transport | IEP | Enrichment |
| BP | GO:0036376 | sodium ion export across plasma membrane | IEP | Enrichment |
| BP | GO:0044036 | cell wall macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0044248 | cellular catabolic process | IEP | Enrichment |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | Enrichment |
| BP | GO:0044764 | multi-organism cellular process | IEP | Enrichment |
| MF | GO:0046917 | triphosphoribosyl-dephospho-CoA synthase activity | IEP | Enrichment |
| BP | GO:0051704 | multi-organism process | IEP | Enrichment |
| MF | GO:0061783 | peptidoglycan muralytic activity | IEP | Enrichment |
| BP | GO:0070839 | metal ion export | IEP | Enrichment |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Enrichment |
| BP | GO:1901136 | carbohydrate derivative catabolic process | IEP | Enrichment |
| BP | GO:1901565 | organonitrogen compound catabolic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR039555 | TraF/TrbB | 25 | 238 |
| No external refs found! |