AAL23502 (PSLT099, trbB)


Aliases : PSLT099, trbB

Description : conjugative transfer [Ensembl]. F plasmid transfer operon protein [Interproscan].


Gene families : OG_02_0005038 (OrthoFinder) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL23502
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
AGT26940 N559_5366 inner membrane protein [Ensembl]. 0.11 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000270 peptidoglycan metabolic process IEP Enrichment
BP GO:0000746 conjugation IEP Enrichment
MF GO:0003796 lysozyme activity IEP Enrichment
CC GO:0005576 extracellular region IEP Enrichment
BP GO:0006022 aminoglycan metabolic process IEP Enrichment
BP GO:0006026 aminoglycan catabolic process IEP Enrichment
BP GO:0006027 glycosaminoglycan catabolic process IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006814 sodium ion transport IEP Enrichment
MF GO:0008948 oxaloacetate decarboxylase activity IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0009253 peptidoglycan catabolic process IEP Enrichment
BP GO:0016998 cell wall macromolecule catabolic process IEP Enrichment
BP GO:0030203 glycosaminoglycan metabolic process IEP Enrichment
BP GO:0035725 sodium ion transmembrane transport IEP Enrichment
BP GO:0036376 sodium ion export across plasma membrane IEP Enrichment
BP GO:0044036 cell wall macromolecule metabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0044764 multi-organism cellular process IEP Enrichment
MF GO:0046917 triphosphoribosyl-dephospho-CoA synthase activity IEP Enrichment
BP GO:0051704 multi-organism process IEP Enrichment
MF GO:0061783 peptidoglycan muralytic activity IEP Enrichment
BP GO:0070839 metal ion export IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
BP GO:1901136 carbohydrate derivative catabolic process IEP Enrichment
BP GO:1901565 organonitrogen compound catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR039555 TraF/TrbB 73 160
No external refs found!