CPC33011 (sbcC, ERS093114_00070)

Aliases : sbcC, ERS093114_00070

Description : Exonuclease SbcC [Ensembl]. AAA domain, Putative exonuclease SbcCD [Interproscan].

Gene families : OG_02_0001177 (OrthoFinder) Phylogenetic Tree(s): OG0001177_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CPC33011
Cluster	HCCA: Cluster_2

Target	Alias	Description	ECC score	Gene Family Method
AAC73500	sbcC, b0397	exonuclease, dsDNA, ATP-dependent [Ensembl]. AAA domain,...	0.11	OrthoFinder
AEA94745	sbcC, OG1RF_12058	exonuclease SbcC [Ensembl]. AAA domain, Putative...	0.02	OrthoFinder
KNA51559	VCV51_033602, SbcC	exonuclease SbcC [Ensembl]. AAA domain, Putative...	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0004665	prephenate dehydrogenase (NADP+) activity	IEP	Enrichment
MF	GO:0005515	protein binding	IEP	Enrichment
BP	GO:0006570	tyrosine metabolic process	IEP	Enrichment
BP	GO:0006571	tyrosine biosynthetic process	IEP	Enrichment
MF	GO:0008977	prephenate dehydrogenase (NAD+) activity	IEP	Enrichment
BP	GO:0009072	aromatic amino acid family metabolic process	IEP	Enrichment
BP	GO:0009073	aromatic amino acid family biosynthetic process	IEP	Enrichment
BP	GO:0009095	aromatic amino acid family biosynthetic process, prephenate pathway	IEP	Enrichment
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	Enrichment
MF	GO:0016628	oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	IEP	Enrichment
MF	GO:0016787	hydrolase activity	IEP	Enrichment
BP	GO:1901605	alpha-amino acid metabolic process	IEP	Enrichment
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR038729	Rad50/SbcC_AAA	6	213

External Links

No external refs found!