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CPC43619 (oppC_1, ERS093114_00434)


Aliases : oppC_1, ERS093114_00434

Description : Oligopeptide transport system permease protein oppC [Ensembl]. N-terminal TM domain of oligopeptide transport permease C, Binding-protein-dependent transport system inner membrane component [Interproscan].


Gene families : OG_02_0000041 (OrthoFinder) Phylogenetic Tree(s): OG0000041_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CPC43619
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AAC73919 gsiD, b0832 glutathione ABC transporter permease [Ensembl].... 0.01 OrthoFinder
AAC74327 oppC, b1245 oligopeptide ABC transporter permease [Ensembl].... 0.02 OrthoFinder
AAC74374 sapC, b1292 antimicrobial peptide transport ABC transporter permease... 0.03 OrthoFinder
AAC74558 ddpC, b1485 D,D-dipeptide ABC transporter permease [Ensembl].... 0.01 OrthoFinder
AAC76567 dppC, b3542 dipeptide/heme ABC transporter permease [Ensembl].... 0.03 OrthoFinder
AAL20183 STM1257 putative ABC transporter [Ensembl].... 0.02 OrthoFinder
AEA95054 opp2C, OG1RF_12367 ABC superfamily ATP binding cassette transporter, ABC... 0.03 OrthoFinder
AGT22075 N559_0253 dipeptide transporter [Ensembl]. N-terminal TM domain of... 0.02 OrthoFinder
AGT23970 N559_2267 oligopeptide ABC transport system permease component... 0.02 OrthoFinder
AKI48109 L2625_00136 oligopeptide ABC transporter, permease protein... 0.02 OrthoFinder
CBI66819 dppC, HPB8_1262 dipeptide ABC transporter, permease protein (DppC)... 0.02 OrthoFinder
CPC43895 oppC_2, ERS093114_00442 Oligopeptide transport system permease protein oppC... 0.02 OrthoFinder
CRP12184 dppC Dipeptide transport system permease protein DppC... 0.03 OrthoFinder
KNA51871 VCV51_030401 binding-protein-dependent transport system inner... 0.03 OrthoFinder
KNA52460 VCV51_030124 binding-protein-dependent transport system inner... 0.02 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001906 cell killing IEP Enrichment
BP GO:0002376 immune system process IEP Enrichment
MF GO:0003725 double-stranded RNA binding IEP Enrichment
CC GO:0005576 extracellular region IEP Enrichment
BP GO:0006952 defense response IEP Enrichment
BP GO:0006955 immune response IEP Enrichment
BP GO:0009405 obsolete pathogenesis IEP Enrichment
BP GO:0009617 response to bacterium IEP Enrichment
BP GO:0015833 peptide transport IEP Enrichment
BP GO:0019835 cytolysis IEP Enrichment
BP GO:0031640 killing of cells of other organism IEP Enrichment
BP GO:0042742 defense response to bacterium IEP Enrichment
BP GO:0042886 amide transport IEP Enrichment
BP GO:0043207 response to external biotic stimulus IEP Enrichment
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP Enrichment
BP GO:0051707 response to other organism IEP Enrichment
BP GO:0051715 cytolysis in other organism IEP Enrichment
BP GO:0098542 defense response to other organism IEP Enrichment
InterPro domains Description Start Stop
IPR000515 MetI-like 100 291
IPR025966 OppC_N 7 51
No external refs found!