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CPC43653 (oppB_1, ERS093114_00435)


Aliases : oppB_1, ERS093114_00435

Description : Oligopeptide transport system permease protein oppB [Ensembl]. Binding-protein-dependent transport system inner membrane component [Interproscan].


Gene families : OG_02_0000034 (OrthoFinder) Phylogenetic Tree(s): OG0000034_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CPC43653
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AAC73918 gsiC, b0831 glutathione ABC transporter permease [Ensembl].... 0.02 OrthoFinder
AAC74326 oppB, b1244 oligopeptide ABC transporter permease [Ensembl].... 0.02 OrthoFinder
AAC74375 sapB, b1293 antimicrobial peptide transport ABC transporter permease... 0.03 OrthoFinder
AAC76568 dppB, b3543 dipeptide/heme ABC transporter permease [Ensembl].... 0.03 OrthoFinder
AAL20610 STM1693, sapB ABC superfamily peptide transport protein [Ensembl].... 0.02 OrthoFinder
AEA95055 opp2B, OG1RF_12368 oligopeptide ABC superfamily ATP binding cassette... 0.03 OrthoFinder
AGT26720 N559_5146, GsiC putative glutathione ABC transporter, permease protein... 0.02 OrthoFinder
AKI48108 L2625_00135 oligopeptide ABC transporter, permease protein... 0.02 OrthoFinder
CBI66820 dppB, HPB8_1263 dipeptide ABC transporter, permease protein (DppB)... 0.02 OrthoFinder
CCP44039 oppB, Rv1283c Probable oligopeptide-transport integral membrane... 0.02 OrthoFinder
CPC43926 oppB_2, ERS093114_00443 peptide ABC transporter permease [Ensembl].... 0.02 OrthoFinder
CRP12152 dppB Dipeptide transport system permease protein DppB... 0.03 OrthoFinder
KNA51872 VCV51_030402 binding-protein-dependent transport system inner... 0.03 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001906 cell killing IEP Enrichment
BP GO:0002376 immune system process IEP Enrichment
MF GO:0003725 double-stranded RNA binding IEP Enrichment
CC GO:0005576 extracellular region IEP Enrichment
BP GO:0006304 DNA modification IEP Enrichment
BP GO:0006952 defense response IEP Enrichment
BP GO:0006955 immune response IEP Enrichment
BP GO:0009617 response to bacterium IEP Enrichment
BP GO:0015833 peptide transport IEP Enrichment
BP GO:0019835 cytolysis IEP Enrichment
BP GO:0031640 killing of cells of other organism IEP Enrichment
BP GO:0042742 defense response to bacterium IEP Enrichment
BP GO:0042886 amide transport IEP Enrichment
BP GO:0043207 response to external biotic stimulus IEP Enrichment
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP Enrichment
BP GO:0051707 response to other organism IEP Enrichment
BP GO:0051715 cytolysis in other organism IEP Enrichment
BP GO:0098542 defense response to other organism IEP Enrichment
InterPro domains Description Start Stop
IPR000515 MetI-like 115 318
No external refs found!