CPC63513 (cidR, ERS093114_00910)


Aliases : cidR, ERS093114_00910

Description : LysR family regulatory protein CidR [Ensembl]. LysR substrate binding domain, Bacterial regulatory helix-turn-helix protein [Interproscan].


Gene families : OG_02_0000002 (OrthoFinder) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CPC63513

Target Alias Description ECC score Gene Family Method Actions
AAC75958 ygfI, b2921 putative DNA-binding transcriptional regulator... 0.03 OrthoFinder
AEA93337 OG1RF_10650 LysR family transcriptional regulator [Ensembl]. LysR... 0.03 OrthoFinder
AGT24322 N559_2646, LysR transcriptional regulator LysR [Ensembl]. LysR substrate... 0.03 OrthoFinder
AKI48437 L2625_00496 transcriptional regulator, LysR family [Ensembl].... 0.04 OrthoFinder
CRP03013 gltC_5 HTH-type transcriptional regulator GltC [Ensembl]. LysR... 0.03 OrthoFinder
KNA49512 VCV51_030313 LysR substrate binding domain-containing protein... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Enrichment
MF GO:0005381 iron ion transmembrane transporter activity IEP Enrichment
BP GO:0006536 glutamate metabolic process IEP Enrichment
BP GO:0006537 glutamate biosynthetic process IEP Enrichment
BP GO:0006826 iron ion transport IEP Enrichment
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Enrichment
BP GO:0009064 glutamine family amino acid metabolic process IEP Enrichment
MF GO:0015093 ferrous iron transmembrane transporter activity IEP Enrichment
MF GO:0015930 glutamate synthase activity IEP Enrichment
BP GO:0015936 coenzyme A metabolic process IEP Enrichment
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Enrichment
MF GO:0034618 arginine binding IEP Enrichment
BP GO:0043648 dicarboxylic acid metabolic process IEP Enrichment
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Enrichment
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Enrichment
BP GO:0051259 protein complex oligomerization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:1901605 alpha-amino acid metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR005119 LysR_subst-bd 83 286
IPR000847 Tscrpt_reg_HTH_LysR 1 57
No external refs found!