CPC65656 (betA, ERS093114_00977)

Aliases : betA, ERS093114_00977

Description : choline dehydrogenase [Ensembl]. GMC oxidoreductase [Interproscan].

Gene families : OG_02_0001599 (OrthoFinder) Phylogenetic Tree(s): OG0001599_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CPC65656
Cluster	HCCA: Cluster_17

Target	Alias	Description	ECC score	Gene Family Method
AAC73414	betA, b0311	choline dehydrogenase, a flavoprotein [Ensembl]. GMC...	0.2	OrthoFinder
AGT25381	N559_3743	choline dehydrogenase [Ensembl].	0.09	OrthoFinder
CRO15678	alkJ_1	Alcohol dehydrogenase [acceptor] [Ensembl]. GMC...	0.04	OrthoFinder
CRP00258	betA_2	Choline dehydrogenase [Ensembl]. GMC oxidoreductase...	0.29	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEA	Interproscan
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0050660	flavin adenine dinucleotide binding	IEA	Interproscan
BP	GO:0055114	obsolete oxidation-reduction process	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0071705	nitrogen compound transport	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR007867	GMC_OxRtase_C	394	532
IPR000172	GMC_OxRdtase_N	8	302

External Links

No external refs found!