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CPC82226 (rpsU, ERS093114_01405)


Aliases : rpsU, ERS093114_01405

Description : 30S ribosomal protein S21 [Ensembl]. Ribosomal protein S21 [Interproscan].


Gene families : OG_02_0000673 (OrthoFinder) Phylogenetic Tree(s): OG0000673_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CPC82226
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AAC76101 rpsU, b3065 30S ribosomal subunit protein S21 [Ensembl]. Ribosomal... 0.06 OrthoFinder
AAL22083 STM3209, rpsU 30S ribosomal subunit protein S21 [Ensembl]. Ribosomal... 0.05 OrthoFinder
CRO83709 rpsU 30S ribosomal protein S21 [Ensembl]. Ribosomal protein... 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0009262 deoxyribonucleotide metabolic process IEP Enrichment
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Enrichment
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
InterPro domains Description Start Stop
IPR001911 Ribosomal_S21 5 57
No external refs found!