1. Home
  2. Species
  3. Staphylococcus aureus
  4. Sequence
  5. CPC89773

CPC89773 (rpsF, ERS093114_01562)


Aliases : rpsF, ERS093114_01562

Description : 30S ribosomalprotein S6p [Ensembl]. Ribosomal protein S6 [Interproscan].


Gene families : OG_02_0000463 (OrthoFinder) Phylogenetic Tree(s): OG0000463_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CPC89773
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AAC77157 rpsF, b4200 30S ribosomal subunit protein S6 [Ensembl]. Ribosomal... 0.33 OrthoFinder
AAL00200 spr1396, rpsF 30S Ribosomal protein S6 (S6) [Ensembl]. Ribosomal... 0.12 OrthoFinder
AAL23211 STM4391, rpsF 30S ribosomal subunit protein S6 [Ensembl]. Ribosomal... 0.31 OrthoFinder
ADK86903 rpsF, MPNE_0260 ribosomal protein S6 [Ensembl]. Ribosomal protein S6... 0.15 OrthoFinder
AEA92694 rpsF, OG1RF_10007 30S ribosomal protein S6 [Ensembl]. Ribosomal protein S6... 0.3 OrthoFinder
AGT26292 N559_4700 30S ribosomal protein S6 [Ensembl]. 0.14 OrthoFinder
AHY40276 rpsF, CJ8421_05320 30S ribosomal protein S6 [Ensembl]. Ribosomal protein S6... 0.27 OrthoFinder
AKI48020 rpsF, L2625_00045 ribosomal protein S6 [Ensembl]. Ribosomal protein S6... 0.07 OrthoFinder
AKP14207 rpsF, WX61_00118 30S ribosomal protein S6 [Ensembl]. Ribosomal protein S6... 0.07 OrthoFinder
CBI65791 rpsF, HPB8_234 small subunit ribosomal protein S6 [Ensembl]. Ribosomal... 0.19 OrthoFinder
CCG26824 No alias SSU ribosomal protein S6p [Ensembl]. Ribosomal protein... 0.19 OrthoFinder
CCP42775 rpsF, Rv0053 30S ribosomal protein S6 RpsF [Ensembl]. Ribosomal... 0.04 OrthoFinder
CRO54025 rpsF 30S ribosomal protein S6 [Ensembl]. Ribosomal protein S6... 0.24 OrthoFinder
EDJ91444 rpsF, CGSHi22421_06732 30S ribosomal protein S6 [Ensembl]. Ribosomal protein S6... 0.1 OrthoFinder
KNA49059 VCV51_033834 ribosomal protein S6 [Ensembl]. Ribosomal protein S6... 0.21 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
MF GO:0019843 rRNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0005451 monovalent cation:proton antiporter activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
MF GO:0009378 four-way junction helicase activity IEP Enrichment
MF GO:0015491 cation:cation antiporter activity IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
InterPro domains Description Start Stop
IPR000529 Ribosomal_S6 4 93
No external refs found!