CPC99411 (sirA, ERS093114_01812)

Aliases : sirA, ERS093114_01812

Description : Siderophore staphylobactin ABC transporter%2C substrate-binding protein SirA [Ensembl]. Periplasmic binding protein [Interproscan].

Gene families : OG_02_0000473 (OrthoFinder) Phylogenetic Tree(s): OG0000473_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: CPC99411
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AAC77246 fecB, b4290 ferric citrate ABC transporter periplasmic binding... 0.04 OrthoFinder
AEA95038 OG1RF_12351 ferric (Fe+3) ABC superfamily ATP binding cassette... 0.03 OrthoFinder
AGT23901 N559_2189 putative iron compound ABC transport system periplasmic... 0.03 OrthoFinder
AGT26713 N559_5139 periplasmic binding protein [Ensembl]. ABC transporter... 0.03 OrthoFinder
CCL17854 BN171_1840014 ABC-type transport system, iron-family extracellular... 0.04 OrthoFinder
CCL19373 fhuD, BN171_3080020 ABC-type transport system, ferrichrome-specific... 0.04 OrthoFinder
KNA47915 VCV51_033862 periplasmic binding protein [Ensembl]. Periplasmic... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Enrichment
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Enrichment
BP GO:0006766 vitamin metabolic process IEP Enrichment
BP GO:0006767 water-soluble vitamin metabolic process IEP Enrichment
BP GO:0006771 riboflavin metabolic process IEP Enrichment
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Enrichment
MF GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity IEP Enrichment
BP GO:0009110 vitamin biosynthetic process IEP Enrichment
BP GO:0009231 riboflavin biosynthetic process IEP Enrichment
BP GO:0009262 deoxyribonucleotide metabolic process IEP Enrichment
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0019865 immunoglobulin binding IEP Enrichment
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Enrichment
BP GO:0042726 flavin-containing compound metabolic process IEP Enrichment
BP GO:0042727 flavin-containing compound biosynthetic process IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
InterPro domains Description Start Stop
IPR002491 ABC_transptr_periplasmic_BD 56 294
No external refs found!