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  5. CPD18848

CPD18848 (yehW, ERS093114_02237)


Aliases : yehW, ERS093114_02237

Description : putative glycine betaine/carnitine/choline transport system permease protein [Ensembl]. Binding-protein-dependent transport system inner membrane component [Interproscan].


Gene families : OG_02_0000079 (OrthoFinder) Phylogenetic Tree(s): OG0000079_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CPD18848
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AKI49422 opuCD, L2625_01522 glycine betaine/L-proline ABC transporter, permease... 0.01 OrthoFinder
AKI49423 opuCC, L2625_01523 glycine betaine/L-proline ABC transporter, glycine... 0.01 OrthoFinder
AKI49424 opuCB, L2625_01524 glycine betaine/L-proline ABC transporter, permease... 0.02 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0043190 ATP-binding cassette (ABC) transporter complex IEP Enrichment
CC GO:0098533 ATPase dependent transmembrane transport complex IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
CC GO:1902495 transmembrane transporter complex IEP Enrichment
CC GO:1904949 ATPase complex IEP Enrichment
CC GO:1990351 transporter complex IEP Enrichment
InterPro domains Description Start Stop
IPR000515 MetI-like 42 215
No external refs found!