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  5. CPD19941

CPD19941 (tcyC, ERS093114_02273)


Aliases : tcyC, ERS093114_02273

Description : amino acid ABC transporter%2C ATP-binding protein [Ensembl]. ABC transporter [Interproscan].


Gene families : OG_02_0000004 (OrthoFinder) Phylogenetic Tree(s): OG0000004_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CPD19941
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AAC73310 metN, b0199 DL-methionine transporter subunit [Ensembl]. NIL domain,... 0.04 OrthoFinder
AAC73753 gltL, b0652 glutamate/aspartate ABC transporter ATPase [Ensembl].... 0.05 OrthoFinder
AAC73951 artP, b0864 arginine ABC transporter ATPase [Ensembl]. ABC... 0.05 OrthoFinder
AAC74984 tcyN, b1917 putative ABC transporter ATPase [Ensembl]. ABC... 0.07 OrthoFinder
AAC75366 hisP, b2306 histidine ABC transporter ATPase [Ensembl]. ABC... 0.03 OrthoFinder
AAK98953 spr0149, ABC-NBD ABC transporter ATP-binding protein-unknown substrate... 0.02 OrthoFinder
AAK99212 spr0408, glnQ ABC transporter ATP-binding protein-glutamine [Ensembl].... 0.04 OrthoFinder
AAK99532 spr0728, glnQ ABC transporter ATP-binding protein-glutamine transport... 0.02 OrthoFinder
AAL00158 spr1354, glnQ ABC transporter ATP-binding protein-glutamine transport... 0.04 OrthoFinder
AAL00828 spr2026, stpA ABC transporter ATP-binding protein-unknown substrate... 0.03 OrthoFinder
AAL19210 STM0247, abc putative ABC superfamily (atp_bind) transport system... 0.04 OrthoFinder
AAL19465 STM0511, sfbB putative ABC-type transport system ATPase component/cell... 0.03 OrthoFinder
AAL19613 STM0662, gltL glutamate/aspartate transporter [Ensembl]. ABC... 0.04 OrthoFinder
AAL19826 STM0891, artP arginine transport system [Ensembl]. ABC transporter... 0.09 OrthoFinder
AAL20553 STM1635 putative ABC-type polar amino acid transport system... 0.04 OrthoFinder
AAL21252 STM2351, hisP histidine and lysine/arginine/ornithine transport... 0.05 OrthoFinder
AEA92870 OG1RF_10183 ABC superfamily ATP binding cassette transporter, ABC... 0.03 OrthoFinder
AEA92877 OG1RF_10190 ABC superfamily ATP binding cassette transporter, ABC... 0.03 OrthoFinder
AEA93182 OG1RF_10495 ABC superfamily ATP binding cassette transporter, ABC... 0.03 OrthoFinder
AEA93225 OG1RF_10538 ABC superfamily ATP binding cassette transporter, ABC... 0.05 OrthoFinder
AEA93585 OG1RF_10898 ABC superfamily ATP binding cassette transporter, ABC... 0.02 OrthoFinder
AEA94371 OG1RF_11684 ABC superfamily ATP binding cassette transporter,... 0.03 OrthoFinder
AEA94605 metN, OG1RF_11918 ABC superfamily ATP binding cassette transporter, ABC... 0.02 OrthoFinder
AGT23023 N559_1259 hypothetical protein [Ensembl]. transmembrane domain... 0.04 OrthoFinder
AGT23308 N559_1556 histidine/lysine/arginine/ornithine transporter subunit... 0.02 OrthoFinder
AGT23905 N559_2193 putative ABC transporter [Ensembl]. 0.02 OrthoFinder
AGT24090 N559_2393 putative ATP-binding component of a transport system [Ensembl]. 0.06 OrthoFinder
AGT24221 N559_2539 ATP-binding component of histidine transport [Ensembl]. 0.03 OrthoFinder
AGT24332 N559_2656 D-and L-methionine ABC transporter ATP-binding protein [Ensembl]. 0.08 OrthoFinder
AGT24560 N559_2893 ABC transporter, ATP-binding protein [Ensembl]. NIL... 0.04 OrthoFinder
AGT25285 N559_3643 ATP-binding protein of glutamate/aspartate transport... 0.04 OrthoFinder
AGT25388 N559_3752 putative ABC transporter [Ensembl]. 0.03 OrthoFinder
AGT25742 N559_4116 glutamate/aspartate transport system ATP-binding... 0.04 OrthoFinder
AGT25826 N559_4201 DL-methionine transporter ATP-binding subunit [Ensembl].... 0.06 OrthoFinder
AKI49733 L2625_01874 amino acid ABC transporter, ATP-binding protein... 0.03 OrthoFinder
AKI50280 hisP, L2625_02448 polar amino acid ABC transporter, ATP-binding protein... 0.02 OrthoFinder
AKP14952 glnQ_1, WX61_00886 Glutamine transport ATP-binding protein GlnQ [Ensembl].... 0.02 OrthoFinder
AKP15749 tcyC, WX61_01714 L-cystine import ATP-binding protein TcyC [Ensembl]. ABC... 0.02 OrthoFinder
CBI67198 metN, HPB8_1641 D-methionine transport system ATP-binding protein... 0.03 OrthoFinder
CCG26203 No alias RTX toxin transporter, ATP-binding protein [Ensembl].... 0.08 OrthoFinder
CCG26326 No alias Amino acid transport ATP-binding protein [Ensembl]. ABC... 0.03 OrthoFinder
CCG26410 No alias ABC-type polar amino acid transport system,ATPase... 0.03 OrthoFinder
CCG26870 No alias Glutamate transport ATP-binding protein [Ensembl]. ABC... 0.04 OrthoFinder
CCL16929 BN171_1000003 ABC-type transport system, aminoacid-family ATP-binding... 0.04 OrthoFinder
CCL17674 metN, BN171_1670006 ABC-type transport system, methionine-specific... 0.05 OrthoFinder
CCL18018 BN171_2030004 ABC-type transport system, aminoacid-family ATP-binding... 0.03 OrthoFinder
CCL18560 BN171_2440001 ABC-type transport system,cystine/aminoacid-family... 0.03 OrthoFinder
CPD30941 glnQ, ERS093114_02522 Glutamine transport ATP-binding protein glnQ [Ensembl].... 0.04 OrthoFinder
CRN71228 hisP_1 Histidine transport ATP-binding protein HisP [Ensembl].... 0.03 OrthoFinder
CRO39434 glnQ_1 Glutamine transport ATP-binding protein GlnQ [Ensembl].... 0.04 OrthoFinder
CRO45104 metN_1 Methionine import ATP-binding protein MetN [Ensembl].... 0.08 OrthoFinder
CRO48464 hisP_2 Histidine transport ATP-binding protein HisP [Ensembl].... 0.03 OrthoFinder
CRO59431 glnQ_2 Glutamine transport ATP-binding protein GlnQ [Ensembl].... 0.03 OrthoFinder
EDJ90253 CGSHi22421_06419 probable D-methionine transport ATP-binding protein... 0.04 OrthoFinder
EDJ90650 CGSHi22421_04053 arginine transport ATP-binding protein [Ensembl]. ABC... 0.04 OrthoFinder
EDJ91873 CGSHi22421_08958 probable amino-acid ABC transporter ATP-binding protein... 0.05 OrthoFinder
KNA53743 VCV51_033269 amino acid ABC transporter [Ensembl]. ABC transporter... 0.04 OrthoFinder
KNA56297 VCV51_030617 D-methionine ABC transporter [Ensembl]. NIL domain, ABC... 0.03 OrthoFinder
KNA58915 VCV51_031260 amino acid ABC transporter [Ensembl]. ABC transporter... 0.03 OrthoFinder
KNA59809 VCV51_030869 arginine ABC transporter [Ensembl]. ABC transporter... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005451 monovalent cation:proton antiporter activity IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006304 DNA modification IEP Enrichment
BP GO:0006353 DNA-templated transcription, termination IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP Enrichment
MF GO:0008324 cation transmembrane transporter activity IEP Enrichment
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015078 proton transmembrane transporter activity IEP Enrichment
MF GO:0015297 antiporter activity IEP Enrichment
MF GO:0015298 solute:cation antiporter activity IEP Enrichment
MF GO:0015299 solute:proton antiporter activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
MF GO:0015491 cation:cation antiporter activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Enrichment
BP GO:0034220 ion transmembrane transport IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:0098655 cation transmembrane transport IEP Enrichment
BP GO:0098660 inorganic ion transmembrane transport IEP Enrichment
BP GO:0098662 inorganic cation transmembrane transport IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
BP GO:1902600 proton transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 18 166
No external refs found!