CPD33378 (gltC, ERS093114_02589)


Aliases : gltC, ERS093114_02589

Description : Transcription activator of glutamate synthase operon [Ensembl]. LysR substrate binding domain, Bacterial regulatory helix-turn-helix protein [Interproscan].


Gene families : OG_02_0000002 (OrthoFinder) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CPD33378
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AGT23557 N559_1823 HTH-type transcriptional regulator cbl [Ensembl]. LysR... 0.04 OrthoFinder
AKI48437 L2625_00496 transcriptional regulator, LysR family [Ensembl].... 0.04 OrthoFinder
CRP45508 benM_8 Ben and cat operon transcriptional regulator [Ensembl].... 0.01 OrthoFinder
KNA49512 VCV51_030313 LysR substrate binding domain-containing protein... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0004150 dihydroneopterin aldolase activity IEP Enrichment
MF GO:0004358 glutamate N-acetyltransferase activity IEP Enrichment
MF GO:0004803 transposase activity IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006313 transposition, DNA-mediated IEP Enrichment
BP GO:0006525 arginine metabolic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0008652 cellular amino acid biosynthetic process IEP Enrichment
BP GO:0009064 glutamine family amino acid metabolic process IEP Enrichment
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0015093 ferrous iron transmembrane transporter activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0032196 transposition IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
BP GO:0046394 carboxylic acid biosynthetic process IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901605 alpha-amino acid metabolic process IEP Enrichment
BP GO:1901607 alpha-amino acid biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR005119 LysR_subst-bd 95 268
IPR000847 Tscrpt_reg_HTH_LysR 3 62
No external refs found!