CPD34897 (lysS, ERS093114_02636)


Aliases : lysS, ERS093114_02636

Description : lysyl-tRNA synthetase [Ensembl]. tRNA synthetases class II (D, OB-fold nucleic acid binding domain [Interproscan].


Gene families : OG_02_0000437 (OrthoFinder) Phylogenetic Tree(s): OG0000437_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CPD34897
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
AAC75928 lysS, b2890 lysine tRNA synthetase, constitutive [Ensembl]. tRNA... 0.04 OrthoFinder
AAK99430 spr0626, lysS Lysyl-tRNA synthetase (lysine--tRNA ligase) (LYSRS)... 0.04 OrthoFinder
AAL21915 STM3040, lysS constitutive lysine tRNA synthetase [Ensembl]. tRNA... 0.02 OrthoFinder
CCG26813 No alias Lysyl-tRNA synthetase (class II) [Ensembl]. tRNA... 0.05 OrthoFinder
EDJ90683 lysS, CGSHi22421_04218 lysyl-tRNA synthetase [Ensembl]. tRNA synthetases class... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006418 tRNA aminoacylation for protein translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003848 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0004478 methionine adenosyltransferase activity IEP Enrichment
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Enrichment
BP GO:0006575 cellular modified amino acid metabolic process IEP Enrichment
BP GO:0006760 folic acid-containing compound metabolic process IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0008716 D-alanine-D-alanine ligase activity IEP Enrichment
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Enrichment
MF GO:0016778 diphosphotransferase activity IEP Enrichment
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Enrichment
MF GO:0016881 acid-amino acid ligase activity IEP Enrichment
MF GO:0035596 methylthiotransferase activity IEP Enrichment
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Enrichment
BP GO:0044272 sulfur compound biosynthetic process IEP Enrichment
BP GO:0046500 S-adenosylmethionine metabolic process IEP Enrichment
MF GO:0050497 alkylthioltransferase activity IEP Enrichment
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Enrichment
InterPro domains Description Start Stop
IPR004364 Aa-tRNA-synt_II 156 492
IPR004365 NA-bd_OB_tRNA 61 138
No external refs found!