1. Home
  2. Species
  3. Clostridioides difficile
  4. Sequence
  5. CCL19417

CCL19417 (BN171_3110010)


Aliases : BN171_3110010

Description : ABC-type transport system, permease [Ensembl]. FtsX-like permease family [Interproscan].


Gene families : OG_02_0000663 (OrthoFinder) Phylogenetic Tree(s): OG0000663_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCL19417
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AAK99617 spr0813, ABC-MSD ABC transporter membrane-spanning permease-unknown... 0.04 OrthoFinder
AEA94343 OG1RF_11656 ABC superfamily ATP binding cassette transporter,... 0.03 OrthoFinder
AEA94800 OG1RF_12113 ABC superfamily ATP binding cassette transporter,... 0.04 OrthoFinder
CCL19489 BN171_3180013 ABC-type transport system, permease [Ensembl]. 0.04 OrthoFinder
CCL19641 BN171_3340008 Abc transporter, permease associated with salivaricin... 0.04 OrthoFinder
CPC66060 ERS093114_00988 ABC transporter permease protein [Ensembl]. FtsX-like... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
MF GO:0008745 N-acetylmuramoyl-L-alanine amidase activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
BP GO:0016311 dephosphorylation IEP Enrichment
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Enrichment
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Enrichment
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Enrichment
MF GO:0061783 peptidoglycan muralytic activity IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
InterPro domains Description Start Stop
IPR003838 ABC3_permease_dom 85 174
UniProtKB U3WZG0