AAK99125 (spr0321, cps2M)

Aliases : spr0321, cps2M

Description : The type 2 capsule locus of Streptococcus pneumoniae [Ensembl]. dTDP-4-dehydrorhamnose 3 [Interproscan].

Gene families : OG_02_0000937 (OrthoFinder) Phylogenetic Tree(s): OG0000937_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AAK99125
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AAC75099 rfbC, b2038 dTDP-4-deoxyrhamnose-3,5-epimerase [Ensembl].... 0.04 OrthoFinder
AAL20998 STM2094, rfbC dTDP-4,deoxyrhamnose 3,5 epimerase [Ensembl].... 0.03 OrthoFinder
AKI49030 rfbC, L2625_01113 dTDP-4-dehydrorhamnose 3,5-epimerase [Ensembl].... 0.03 OrthoFinder
CRP49948 rmlC dTDP-4-dehydrorhamnose 3,5-epimerase [Ensembl].... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Enrichment
BP GO:0015833 peptide transport IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
BP GO:0042886 amide transport IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
InterPro domains Description Start Stop
IPR000888 dTDP_sugar_isom 17 188
No external refs found!