CCL19519 (BN171_3190004)

Aliases : BN171_3190004

Description : Transcriptional regulator, RpiR family [Ensembl]. Helix-turn-helix domain, SIS domain [Interproscan].

Gene families : OG_02_0000035 (OrthoFinder) Phylogenetic Tree(s): OG0000035_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CCL19519
Cluster	HCCA: Cluster_28

Target	Alias	Description	ECC score	Gene Family Method	Actions
AAL20803	STM1887, yebK	putative transcriptional regulator [Ensembl]. SIS...	0.04	OrthoFinder
AGT23624	N559_1891, HexR	transcriptional regulator HexR [Ensembl]....	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097367	carbohydrate derivative binding	IEA	Interproscan
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	IEA	Interproscan

Type	GO Term	Name	Evidence	Source
MF	GO:0003677	DNA binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001347	SIS_dom	111	211
IPR000281	HTH_RpiR	7	72

External Links

UniProtKB	U3X2V9