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  5. CCG26409

CCG26409


Description : Amino acid ABC transporter, amino acid-binding protein [Ensembl]. Bacterial extracellular solute-binding proteins [Interproscan].


Gene families : OG_02_0000028 (OrthoFinder) Phylogenetic Tree(s): OG0000028_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCG26409
Cluster HCAA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AAL00157 spr1353, glnH ABC transporter substrate-binding protein-glutamine... 0.06 OrthoFinder
AAL19825 STM0890, artI arginine transport system [Ensembl]. Bacterial... 0.02 OrthoFinder
AAL21256 STM2355, argT lysine/arginine/ornithine transport protein [Ensembl].... 0.02 OrthoFinder
AAL23174 STM4351 putative arginine-binding periplasmic protein [Ensembl].... 0.01 OrthoFinder
AGT23304 N559_1552 lysine-arginine-ornithine-binding periplasmic protein... 0.03 OrthoFinder
AGT23305 N559_1553 histidine ABC transporter periplasmic substrate-binding... 0.03 OrthoFinder
AGT23574 N559_1841 cystine transporter subunit [Ensembl]. Solute-binding... 0.03 OrthoFinder
AGT25453 N559_3817 amino acid ABC transporter periplasmic amino... 0.03 OrthoFinder
AKP15747 WX61_01712 putative amino-acid ABC transporter-binding protein... 0.03 OrthoFinder
CCL16927 BN171_1000001 ABC-type transport system, aminoacid-family... 0.02 OrthoFinder
CPD19875 ERS093114_02271 Cysteine ABC transporter%2C substrate-binding protein... 0.03 OrthoFinder
CRN71135 argT_1 Lysine-arginine-ornithine-binding periplasmic protein... 0.04 OrthoFinder
CRP46906 fliY_2 Sulfate starvation-induced protein 7 [Ensembl].... 0.04 OrthoFinder
CRP49296 artJ ABC transporter arginine-binding protein 1 precursor... 0.02 OrthoFinder
EDJ91875 CGSHi22421_08968 CTP synthetase [Ensembl]. Bacterial extracellular... 0.03 OrthoFinder
KNA58916 VCV51_031259 lysine-arginine-ornithine-binding periplasmic protein... 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0000921 septin ring assembly IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0004371 glycerone kinase activity IEP Enrichment
MF GO:0004486 methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity IEP Enrichment
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP Enrichment
MF GO:0004817 cysteine-tRNA ligase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005856 cytoskeleton IEP Enrichment
CC GO:0005940 septin ring IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0007010 cytoskeleton organization IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0008312 7S RNA binding IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
BP GO:0031106 septin ring organization IEP Enrichment
CC GO:0032156 septin cytoskeleton IEP Enrichment
BP GO:0032185 septin cytoskeleton organization IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0032784 regulation of DNA-templated transcription, elongation IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
BP GO:0070925 organelle assembly IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR001638 Solute-binding_3/MltF_N 43 268
No external refs found!