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  5. CCG26585

CCG26585


Description : LSU ribosomal protein L27p [Ensembl]. Ribosomal L27 protein [Interproscan].


Gene families : OG_02_0000421 (OrthoFinder) Phylogenetic Tree(s): OG0000421_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCG26585
Cluster HCAA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AAC76217 rpmA, b3185 50S ribosomal subunit protein L27 [Ensembl]. Ribosomal... 0.12 OrthoFinder
AAL22172 STM3303, rpmA 50S ribosomal subunit protein L27 [Ensembl]. Ribosomal... 0.13 OrthoFinder
AEA93392 rpmA, OG1RF_10705 50S ribosomal protein L27 [Ensembl]. Ribosomal L27... 0.09 OrthoFinder
AGT22370 N559_0572 50S ribosomal protein L27 [Ensembl]. 0.04 OrthoFinder
AHY39368 rpmA, CJ8421_00485 50S ribosomal protein L27 [Ensembl]. Ribosomal L27... 0.04 OrthoFinder
AKI49537 rpmA, L2625_01642 ribosomal protein L27 [Ensembl]. Ribosomal protein L27... 0.06 OrthoFinder
CBI66822 rpmA, HPB8_1265 large subunit ribosomal protein L27 [Ensembl]. Ribosomal... 0.04 OrthoFinder
CCL17313 rpmA, BN171_1430040 50S ribosomal protein L27 [Ensembl]. Ribosomal L27... 0.05 OrthoFinder
CCP45234 rpmA, Rv2441c 50S ribosomal protein L27 RpmA [Ensembl]. Ribosomal L27... 0.04 OrthoFinder
CPC84847 rpmA, ERS093114_01475 50S ribosomal protein L25 [Ensembl]. Ribosomal L27... 0.13 OrthoFinder
CRN65841 rpmA 50S ribosomal protein L27 [Ensembl]. Ribosomal L27... 0.11 OrthoFinder
EDJ91659 rpmA, CGSHi22421_07888 50S ribosomal protein L27 [Ensembl]. Ribosomal L27... 0.03 OrthoFinder
KNA50265 VCV51_033696 ribosomal L27 protein [Ensembl]. Ribosomal L27 protein... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
BP GO:0032784 regulation of DNA-templated transcription, elongation IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001684 Ribosomal_L27 13 92
No external refs found!