CCL19686 (BN171_340003)


Aliases : BN171_340003

Description : Transcriptional regulator, sigma-54-dependent [Ensembl]. PAS domain, Bacterial regulatory protein, Sigma-54 interaction domain [Interproscan].


Gene families : OG_02_0000008 (OrthoFinder) Phylogenetic Tree(s): OG0000008_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCL19686
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
AAC75544 hyfR, b2491 hydrogenase-4 transcriptional activator [Ensembl]. GAF... 0.04 OrthoFinder
AGT22935 N559_1166, FhlA formate hydrogenlyase transcriptional activator FhlA... 0.03 OrthoFinder
EDJ91589 CGSHi22421_07457 transcriptional regulatory protein [Ensembl].... 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
MF GO:0008134 transcription factor binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Enrichment
MF GO:0000287 magnesium ion binding IEP Enrichment
InterPro domains Description Start Stop
IPR002078 Sigma_54_int 229 395
IPR000014 PAS 114 208
IPR002197 HTH_Fis 503 537
UniProtKB U3X056