Aliases : SitD
Description : Manganese ABC transporter, inner membrane permease protein SitD [Ensembl]. ABC 3 transport family [Interproscan].
Gene families : OG_02_0000141 (OrthoFinder) Phylogenetic Tree(s): OG0000141_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: CCG26737 | |
Cluster | HCAA: Cluster_4 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AAC74929 | znuB, b1859 | zinc ABC transporter permease [Ensembl]. ABC 3 transport... | 0.02 | OrthoFinder | |
AEA92740 | zurM, OG1RF_10053 | metal cation ABC superfamily ATP binding cassette... | 0.04 | OrthoFinder | |
AEA94365 | OG1RF_11678 | ABC superfamily ATP binding cassette transporter,... | 0.06 | OrthoFinder | |
AHY39413 | CJ8421_00720 | Zinc ABC transporter, inner membrane permease protein... | 0.02 | OrthoFinder | |
AKI49843 | mntC, L2625_01990 | manganese ABC transporter, permease protein [Ensembl].... | 0.03 | OrthoFinder | |
CRP72736 | znuB_2 | High-affinity zinc uptake system membrane protein ZnuB... | 0.02 | OrthoFinder | |
EDJ90087 | CGSHi22421_06573 | iron (chelated) ABC transporter permease protein... | 0.04 | OrthoFinder | |
EDJ91592 | hfq, CGSHi22421_07472 | RNA-binding protein Hfq [Ensembl]. ABC 3 transport... | 0.04 | OrthoFinder | |
KNA59605 | VCV51_031395 | zinc ABC transporter permease [Ensembl]. ABC 3 transport... | 0.03 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005887 | integral component of plasma membrane | IEA | Interproscan |
MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEA | Interproscan |
CC | GO:0043190 | ATP-binding cassette (ABC) transporter complex | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
MF | GO:0003937 | IMP cyclohydrolase activity | IEP | Enrichment |
MF | GO:0004071 | aspartate-ammonia ligase activity | IEP | Enrichment |
MF | GO:0004643 | phosphoribosylaminoimidazolecarboxamide formyltransferase activity | IEP | Enrichment |
MF | GO:0005524 | ATP binding | IEP | Enrichment |
BP | GO:0015833 | peptide transport | IEP | Enrichment |
MF | GO:0016603 | glutaminyl-peptide cyclotransferase activity | IEP | Enrichment |
MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | Enrichment |
MF | GO:0016814 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | IEP | Enrichment |
MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
MF | GO:0019238 | cyclohydrolase activity | IEP | Enrichment |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Enrichment |
MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Enrichment |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
MF | GO:0036094 | small molecule binding | IEP | Enrichment |
BP | GO:0042886 | amide transport | IEP | Enrichment |
MF | GO:0043168 | anion binding | IEP | Enrichment |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001626 | ABC_TroCD | 1 | 85 |
No external refs found! |