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  5. CCG26737

CCG26737 (SitD)


Aliases : SitD

Description : Manganese ABC transporter, inner membrane permease protein SitD [Ensembl]. ABC 3 transport family [Interproscan].


Gene families : OG_02_0000141 (OrthoFinder) Phylogenetic Tree(s): OG0000141_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCG26737
Cluster HCAA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AAC74929 znuB, b1859 zinc ABC transporter permease [Ensembl]. ABC 3 transport... 0.02 OrthoFinder
AEA92740 zurM, OG1RF_10053 metal cation ABC superfamily ATP binding cassette... 0.04 OrthoFinder
AEA94365 OG1RF_11678 ABC superfamily ATP binding cassette transporter,... 0.06 OrthoFinder
AHY39413 CJ8421_00720 Zinc ABC transporter, inner membrane permease protein... 0.02 OrthoFinder
AKI49843 mntC, L2625_01990 manganese ABC transporter, permease protein [Ensembl].... 0.03 OrthoFinder
CRP72736 znuB_2 High-affinity zinc uptake system membrane protein ZnuB... 0.02 OrthoFinder
EDJ90087 CGSHi22421_06573 iron (chelated) ABC transporter permease protein... 0.04 OrthoFinder
EDJ91592 hfq, CGSHi22421_07472 RNA-binding protein Hfq [Ensembl]. ABC 3 transport... 0.04 OrthoFinder
KNA59605 VCV51_031395 zinc ABC transporter permease [Ensembl]. ABC 3 transport... 0.03 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0005887 integral component of plasma membrane IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
CC GO:0043190 ATP-binding cassette (ABC) transporter complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003937 IMP cyclohydrolase activity IEP Enrichment
MF GO:0004071 aspartate-ammonia ligase activity IEP Enrichment
MF GO:0004643 phosphoribosylaminoimidazolecarboxamide formyltransferase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0015833 peptide transport IEP Enrichment
MF GO:0016603 glutaminyl-peptide cyclotransferase activity IEP Enrichment
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Enrichment
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0019238 cyclohydrolase activity IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042886 amide transport IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
InterPro domains Description Start Stop
IPR001626 ABC_TroCD 1 85
No external refs found!