CCG26819


Description : Excinuclease ABC subunit A [Ensembl]. ABC transporter, UvrA interaction domain, UvrA DNA-binding domain [Interproscan].


Gene families : OG_02_0000216 (OrthoFinder) Phylogenetic Tree(s): OG0000216_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCG26819
Cluster HCAA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AAC77028 uvrA, b4058 ATPase and DNA damage recognition protein of nucleotide... 0.03 OrthoFinder
AAK98975 spr0171, uvrA Excinuclease ABC-subunit A [Ensembl]. ABC transporter,... 0.04 OrthoFinder
AGT26437 N559_4853 excinuclease ABC subunit A [Ensembl]. UvrA DNA-binding... 0.03 OrthoFinder
AKI50045 L2625_02200 excinuclease ABC, A subunit, putative [Ensembl]. UvrA... 0.03 OrthoFinder
CCL19859 uvrA, BN171_3570008 Excinuclease ABC subunit A [Ensembl]. UvrA interaction... 0.04 OrthoFinder
CPC48651 uvrA, ERS093114_00594 Excinuclease ABC subunit A [Ensembl]. ABC transporter,... 0.03 OrthoFinder
EDJ90844 CGSHi22421_05445 excinuclease ABC subunit A [Ensembl]. UvrA DNA-binding... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP Enrichment
MF GO:0004140 dephospho-CoA kinase activity IEP Enrichment
MF GO:0004150 dihydroneopterin aldolase activity IEP Enrichment
MF GO:0004476 mannose-6-phosphate isomerase activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0004820 glycine-tRNA ligase activity IEP Enrichment
MF GO:0004832 valine-tRNA ligase activity IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0006109 regulation of carbohydrate metabolic process IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006438 valyl-tRNA aminoacylation IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0015128 gluconate transmembrane transporter activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
MF GO:0042879 aldonate transmembrane transporter activity IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
InterPro domains Description Start Stop
IPR041552 UvrA_DNA-bd 288 396
IPR003439 ABC_transporter-like_ATP-bd 624 860
IPR041102 UvrA_inter 132 238
No external refs found!