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  5. CCG26822

CCG26822


Description : SSU ribosomal protein S18p @ SSU ribosomal protein S18p, zinc-independent [Ensembl]. Ribosomal protein S18 [Interproscan].


Gene families : OG_02_0000330 (OrthoFinder) Phylogenetic Tree(s): OG0000330_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCG26822
Cluster HCAA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AAC77159 rpsR, b4202 30S ribosomal subunit protein S18 [Ensembl]. Ribosomal... 0.1 OrthoFinder
AAL00198 spr1394, rpsR 30S Ribosomal protein S18 [Ensembl]. Ribosomal protein... 0.04 OrthoFinder
AAL23213 STM4393, rpsR 30S ribosomal subunit protein S18 [Ensembl]. Ribosomal... 0.09 OrthoFinder
ADK87142 rpsR, MPNE_0262 ribosomal protein S18 [Ensembl]. Ribosomal protein S18... 0.05 OrthoFinder
AEA92696 rpsR, OG1RF_10009 30S ribosomal protein S18 [Ensembl]. Ribosomal protein... 0.09 OrthoFinder
AGT26291 N559_4699 30S ribosomal protein S18 [Ensembl]. 0.04 OrthoFinder
AHY40278 rpsR, CJ8421_05330 30S ribosomal protein S18 [Ensembl]. Ribosomal protein... 0.03 OrthoFinder
AKI48022 rpsR, L2625_00047 ribosomal protein S18 [Ensembl]. Ribosomal protein S18... 0.09 OrthoFinder
AKP14205 rpsR, WX61_00116 30S ribosomal protein S18 [Ensembl]. Ribosomal protein... 0.02 OrthoFinder
CBI65793 rpsR, HPB8_236 small subunit ribosomal protein S18 [Ensembl]. Ribosomal... 0.02 OrthoFinder
CPC89687 rpsR, ERS093114_01560 30S ribosomalprotein S18p [Ensembl]. Ribosomal protein... 0.13 OrthoFinder
CRO53994 rpsR 30S ribosomal protein S18 [Ensembl]. Ribosomal protein... 0.03 OrthoFinder
EDJ91446 rpsR, CGSHi22421_06742 30S ribosomal protein S18 [Ensembl]. Ribosomal protein... 0.08 OrthoFinder
KNA49061 VCV51_033836 ribosomal protein S18 [Ensembl]. Ribosomal protein S18... 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003937 IMP cyclohydrolase activity IEP Enrichment
MF GO:0004071 aspartate-ammonia ligase activity IEP Enrichment
MF GO:0004529 exodeoxyribonuclease activity IEP Enrichment
MF GO:0004536 deoxyribonuclease activity IEP Enrichment
MF GO:0004643 phosphoribosylaminoimidazolecarboxamide formyltransferase activity IEP Enrichment
BP GO:0006308 DNA catabolic process IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0007154 cell communication IEP Enrichment
BP GO:0007267 cell-cell signaling IEP Enrichment
MF GO:0008855 exodeoxyribonuclease VII activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0009372 quorum sensing IEP Enrichment
BP GO:0009595 detection of biotic stimulus IEP Enrichment
BP GO:0009607 response to biotic stimulus IEP Enrichment
MF GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Enrichment
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Enrichment
MF GO:0016895 exodeoxyribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
MF GO:0019238 cyclohydrolase activity IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0023052 signaling IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0044764 multi-organism cellular process IEP Enrichment
BP GO:0051606 detection of stimulus IEP Enrichment
BP GO:0051704 multi-organism process IEP Enrichment
BP GO:0060245 detection of cell density IEP Enrichment
InterPro domains Description Start Stop
IPR001648 Ribosomal_S18 22 73
No external refs found!