Description : SSU ribosomal protein S18p @ SSU ribosomal protein S18p, zinc-independent [Ensembl]. Ribosomal protein S18 [Interproscan].
Gene families : OG_02_0000330 (OrthoFinder) Phylogenetic Tree(s): OG0000330_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: CCG26822 | |
Cluster | HCAA: Cluster_4 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AAC77159 | rpsR, b4202 | 30S ribosomal subunit protein S18 [Ensembl]. Ribosomal... | 0.1 | OrthoFinder | |
AAL00198 | spr1394, rpsR | 30S Ribosomal protein S18 [Ensembl]. Ribosomal protein... | 0.04 | OrthoFinder | |
AAL23213 | STM4393, rpsR | 30S ribosomal subunit protein S18 [Ensembl]. Ribosomal... | 0.09 | OrthoFinder | |
ADK87142 | rpsR, MPNE_0262 | ribosomal protein S18 [Ensembl]. Ribosomal protein S18... | 0.05 | OrthoFinder | |
AEA92696 | rpsR, OG1RF_10009 | 30S ribosomal protein S18 [Ensembl]. Ribosomal protein... | 0.09 | OrthoFinder | |
AGT26291 | N559_4699 | 30S ribosomal protein S18 [Ensembl]. | 0.04 | OrthoFinder | |
AHY40278 | rpsR, CJ8421_05330 | 30S ribosomal protein S18 [Ensembl]. Ribosomal protein... | 0.03 | OrthoFinder | |
AKI48022 | rpsR, L2625_00047 | ribosomal protein S18 [Ensembl]. Ribosomal protein S18... | 0.09 | OrthoFinder | |
AKP14205 | rpsR, WX61_00116 | 30S ribosomal protein S18 [Ensembl]. Ribosomal protein... | 0.02 | OrthoFinder | |
CBI65793 | rpsR, HPB8_236 | small subunit ribosomal protein S18 [Ensembl]. Ribosomal... | 0.02 | OrthoFinder | |
CPC89687 | rpsR, ERS093114_01560 | 30S ribosomalprotein S18p [Ensembl]. Ribosomal protein... | 0.13 | OrthoFinder | |
CRO53994 | rpsR | 30S ribosomal protein S18 [Ensembl]. Ribosomal protein... | 0.03 | OrthoFinder | |
EDJ91446 | rpsR, CGSHi22421_06742 | 30S ribosomal protein S18 [Ensembl]. Ribosomal protein... | 0.08 | OrthoFinder | |
KNA49061 | VCV51_033836 | ribosomal protein S18 [Ensembl]. Ribosomal protein S18... | 0.05 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003937 | IMP cyclohydrolase activity | IEP | Enrichment |
MF | GO:0004071 | aspartate-ammonia ligase activity | IEP | Enrichment |
MF | GO:0004529 | exodeoxyribonuclease activity | IEP | Enrichment |
MF | GO:0004536 | deoxyribonuclease activity | IEP | Enrichment |
MF | GO:0004643 | phosphoribosylaminoimidazolecarboxamide formyltransferase activity | IEP | Enrichment |
BP | GO:0006308 | DNA catabolic process | IEP | Enrichment |
BP | GO:0006412 | translation | IEP | Enrichment |
BP | GO:0006518 | peptide metabolic process | IEP | Enrichment |
BP | GO:0007154 | cell communication | IEP | Enrichment |
BP | GO:0007267 | cell-cell signaling | IEP | Enrichment |
MF | GO:0008855 | exodeoxyribonuclease VII activity | IEP | Enrichment |
MF | GO:0009055 | electron transfer activity | IEP | Enrichment |
BP | GO:0009372 | quorum sensing | IEP | Enrichment |
BP | GO:0009595 | detection of biotic stimulus | IEP | Enrichment |
BP | GO:0009607 | response to biotic stimulus | IEP | Enrichment |
MF | GO:0016796 | exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Enrichment |
MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | Enrichment |
MF | GO:0016814 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | IEP | Enrichment |
MF | GO:0016895 | exodeoxyribonuclease activity, producing 5'-phosphomonoesters | IEP | Enrichment |
MF | GO:0019238 | cyclohydrolase activity | IEP | Enrichment |
MF | GO:0019843 | rRNA binding | IEP | Enrichment |
BP | GO:0023052 | signaling | IEP | Enrichment |
BP | GO:0043043 | peptide biosynthetic process | IEP | Enrichment |
BP | GO:0043603 | cellular amide metabolic process | IEP | Enrichment |
BP | GO:0043604 | amide biosynthetic process | IEP | Enrichment |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | Enrichment |
BP | GO:0044764 | multi-organism cellular process | IEP | Enrichment |
BP | GO:0051606 | detection of stimulus | IEP | Enrichment |
BP | GO:0051704 | multi-organism process | IEP | Enrichment |
BP | GO:0060245 | detection of cell density | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001648 | Ribosomal_S18 | 22 | 73 |
No external refs found! |