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  5. CCG26908

CCG26908


Description : Tyrosyl-tRNA synthetase [Ensembl]. S4 domain, tRNA synthetases class I (W and Y) [Interproscan].


Gene families : OG_02_0000263 (OrthoFinder) Phylogenetic Tree(s): OG0000263_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCG26908
Cluster HCAA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AEA94136 tyrS2, OG1RF_11449 tyrosine--tRNA ligase [Ensembl]. S4 domain, tRNA... 0.05 OrthoFinder
AKI49596 tyrS, L2625_01705 tyrosyl-tRNA synthetase [Ensembl]. RNA-binding S4... 0.08 OrthoFinder
AKP15380 tyrS, WX61_01333 Tyrosine--tRNA ligase [Ensembl]. tRNA synthetases class... 0.03 OrthoFinder
CBI66540 tyrS, HPB8_983 tyrosyl-tRNA synthetase [Ensembl]. S4 domain, tRNA... 0.03 OrthoFinder
CRO81407 tyrS_1 Tyrosine--tRNA ligase [Ensembl]. tRNA synthetases class... 0.02 OrthoFinder
EDJ90927 CGSHi22421_03723 tyrosyl-tRNA synthetase [Ensembl]. S4 domain, tRNA... 0.03 OrthoFinder
KNA51882 VCV51_033536 tyrosyl-tRNA synthetase [Ensembl]. S4 domain, tRNA... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006418 tRNA aminoacylation for protein translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0008239 dipeptidyl-peptidase activity IEP Enrichment
MF GO:0008312 7S RNA binding IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0015833 peptide transport IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0032784 regulation of DNA-templated transcription, elongation IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0042886 amide transport IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR002305 aa-tRNA-synth_Ic 29 322
IPR002942 S4_RNA-bd 354 399
No external refs found!