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  5. CCG26981

CCG26981


Description : GTP pyrophosphokinase, (p)ppGpp synthetase I [Ensembl]. HD domain, TGS domain, ACT domain, Region found in RelA / SpoT proteins [Interproscan].


Gene families : OG_02_0000300 (OrthoFinder) Phylogenetic Tree(s): OG0000300_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCG26981
Cluster HCAA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AAL00291 spr1487, relA GTP pyrophosphokinase [Ensembl]. HD domain, ACT domain,... 0.08 OrthoFinder
AAL21836 STM2956, relA (p)ppGpp synthetase I [Ensembl]. HD domain, ACT domain,... 0.03 OrthoFinder
AAL22601 STM3742, spoT (p)ppGpp synthetase II [Ensembl]. HD domain, ACT domain,... 0.02 OrthoFinder
AEA94323 relA, OG1RF_11636 GTP diphosphokinase [Ensembl]. HD domain, ACT domain,... 0.04 OrthoFinder
AGT21973 N559_0148 bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis... 0.03 OrthoFinder
AKP14447 relA, WX61_00365 GTP pyrophosphokinase [Ensembl]. HD domain, TGS domain,... 0.02 OrthoFinder
CRO27413 spoT_1 Bifunctional (p)ppGpp synthase/hydrolase SpoT [Ensembl].... 0.03 OrthoFinder
EDJ90466 CGSHi22421_06197 GTP pyrophosphokinase [Ensembl]. HD domain, TGS domain,... 0.03 OrthoFinder
KNA51143 VCV51_031646 RelA/SpoT family protein [Ensembl]. HD domain, ACT... 0.05 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
BP GO:0002097 tRNA wobble base modification IEP Enrichment
BP GO:0002100 tRNA wobble adenosine to inosine editing IEP Enrichment
MF GO:0004347 glucose-6-phosphate isomerase activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006382 adenosine to inosine editing IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009143 nucleoside triphosphate catabolic process IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0016553 base conversion or substitution editing IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR002912 ACT_dom 658 736
IPR004095 TGS 395 454
IPR007685 RelA_SpoT 240 348
No external refs found!