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  5. CCG27005

CCG27005


Description : Lactose phosphotransferase system repressor [Ensembl]. DeoR C terminal sensor domain, DeoR-like helix-turn-helix domain [Interproscan].


Gene families : OG_02_0000026 (OrthoFinder) Phylogenetic Tree(s): OG0000026_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCG27005
Cluster HCAA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AAC75749 srlR, b2707 sorbitol-inducible srl operon transcriptional repressor... 0.05 OrthoFinder
AAK99871 spr1067, lacR Lactose phosphotransferase system repressor [Ensembl].... 0.13 OrthoFinder
AAL00776 spr1974, fcsR Regulator of fucose operon [Ensembl]. DeoR C terminal... 0.09 OrthoFinder
AAL21717 STM2837, srlR transcriptional repressor for glucitol operon [Ensembl].... 0.04 OrthoFinder
AAL22134 STM3262 transcriptional regulator of sugar metabolism [Ensembl].... 0.02 OrthoFinder
AAL23201 STM4381, yjfQ putative transcriptional repressor [Ensembl]. DeoR C... 0.03 OrthoFinder
AEA93589 OG1RF_10902 DeoR family transcriptional regulator [Ensembl]. DeoR C... 0.05 OrthoFinder
AGT22846 N559_1069, FucR DNA-binding transcriptional activator FucR [Ensembl].... 0.03 OrthoFinder
AGT24279 N559_2603 DeoR transcriptional regulator [Ensembl]. DeoR-like... 0.03 OrthoFinder
AKI48314 L2625_00368 transcriptional regulator, DeoR family [Ensembl].... 0.03 OrthoFinder
AKI50105 glcR, L2625_02263 transcriptional regulator of sugar metabolism, DeoR... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006040 amino sugar metabolic process IEP Enrichment
BP GO:0006050 mannosamine metabolic process IEP Enrichment
BP GO:0006051 N-acetylmannosamine metabolic process IEP Enrichment
MF GO:0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity IEP Enrichment
MF GO:0015144 carbohydrate transmembrane transporter activity IEP Enrichment
MF GO:0051920 peroxiredoxin activity IEP Enrichment
InterPro domains Description Start Stop
IPR014036 DeoR_C 80 236
IPR001034 DeoR_HTH 6 60
No external refs found!