CCG27157 (SmpB)


Aliases : SmpB

Description : tmRNA-binding protein SmpB [Ensembl]. SmpB protein [Interproscan].


Gene families : OG_02_0000546 (OrthoFinder) Phylogenetic Tree(s): OG0000546_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCG27157
Cluster HCAA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
AHY40311 smpB, CJ8421_05495 SsrA-binding protein [Ensembl]. SmpB protein [Interproscan]. 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003896 DNA primase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005337 nucleoside transmembrane transporter activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006865 amino acid transport IEP Enrichment
MF GO:0015234 thiamine transmembrane transporter activity IEP Enrichment
MF GO:0015658 branched-chain amino acid transmembrane transporter activity IEP Enrichment
BP GO:0015803 branched-chain amino acid transport IEP Enrichment
BP GO:0015833 peptide transport IEP Enrichment
BP GO:0015849 organic acid transport IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016603 glutaminyl-peptide cyclotransferase activity IEP Enrichment
MF GO:0016755 aminoacyltransferase activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0034257 nicotinamide riboside transmembrane transporter activity IEP Enrichment
BP GO:0042886 amide transport IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:1901474 azole transmembrane transporter activity IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR000037 SsrA-bd_prot 10 151
No external refs found!