Description : LSU ribosomal protein L29p (L35e) [Ensembl]. Ribosomal L29 protein [Interproscan].
Gene families : OG_02_0000484 (OrthoFinder) Phylogenetic Tree(s): OG0000484_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: CCG27387 | |
Cluster | HCAA: Cluster_4 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AAC76337 | rpmC, b3312 | 50S ribosomal subunit protein L29 [Ensembl]. Ribosomal... | 0.27 | OrthoFinder | |
AAK99001 | spr0197, rpmC | 50S Ribosomal protein L29 [Ensembl]. Ribosomal L29... | 0.18 | OrthoFinder | |
AAL22295 | STM3432, rpmC | 50S ribosomal subunit protein L29 [Ensembl]. Ribosomal... | 0.26 | OrthoFinder | |
AEA92846 | rpmC, OG1RF_10159 | 50S ribosomal protein L29 [Ensembl]. Ribosomal L29... | 0.07 | OrthoFinder | |
AGT22250 | N559_0442 | 50S ribosomal protein L29 [Ensembl]. | 0.07 | OrthoFinder | |
AHY40884 | CJ8421_08560 | 50S ribosomal protein L29 [Ensembl]. Ribosomal L29... | 0.16 | OrthoFinder | |
AKI50559 | rpmC, L2625_02769 | ribosomal protein L29 [Ensembl]. Ribosomal protein... | 0.06 | OrthoFinder | |
AKP15131 | rpmC, WX61_01077 | 50S ribosomal protein L29 [Ensembl]. Ribosomal L29... | 0.09 | OrthoFinder | |
CCL20571 | rpmC, BN171_70011 | 50S ribosomal protein L29 [Ensembl]. Ribosomal L29... | 0.17 | OrthoFinder | |
CCP43453 | rpmC, Rv0709 | 50S ribosomal protein L29 RpmC [Ensembl]. Ribosomal L29... | 0.1 | OrthoFinder | |
CPD13781 | rpmC, ERS093114_02130 | 50S ribosomal protein L29 [Ensembl]. Ribosomal L29... | 0.21 | OrthoFinder | |
CRO73990 | rpmC | 50S ribosomal protein L29 [Ensembl]. Ribosomal L29... | 0.2 | OrthoFinder | |
EDJ91362 | CGSHi22421_04643 | 50S ribosomal protein L29 [Ensembl]. Ribosomal L29... | 0.25 | OrthoFinder | |
KNA54980 | VCV51_033163 | ribosomal L29 protein [Ensembl]. Ribosomal L29 protein... | 0.21 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
MF | GO:0003723 | RNA binding | IEP | Enrichment |
MF | GO:0004071 | aspartate-ammonia ligase activity | IEP | Enrichment |
MF | GO:0004190 | aspartic-type endopeptidase activity | IEP | Enrichment |
BP | GO:0006412 | translation | IEP | Enrichment |
BP | GO:0006518 | peptide metabolic process | IEP | Enrichment |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | Enrichment |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | Enrichment |
BP | GO:0019538 | protein metabolic process | IEP | Enrichment |
MF | GO:0019843 | rRNA binding | IEP | Enrichment |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Enrichment |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Enrichment |
BP | GO:0043043 | peptide biosynthetic process | IEP | Enrichment |
BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
BP | GO:0043603 | cellular amide metabolic process | IEP | Enrichment |
BP | GO:0043604 | amide biosynthetic process | IEP | Enrichment |
BP | GO:0044267 | cellular protein metabolic process | IEP | Enrichment |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Enrichment |
MF | GO:0070001 | aspartic-type peptidase activity | IEP | Enrichment |
MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Enrichment |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001854 | Ribosomal_L29/L35 | 11 | 66 |
No external refs found! |