CCG27397


Description : LSU ribosomal protein L30p (L7e) [Ensembl]. Ribosomal protein L30p/L7e [Interproscan].


Gene families : OG_02_0000682 (OrthoFinder) Phylogenetic Tree(s): OG0000682_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCG27397
Cluster HCAA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AAC76327 rpmD, b3302 50S ribosomal subunit protein L30 [Ensembl]. Ribosomal... 0.16 OrthoFinder
AAK99011 spr0207, rpmD 50S Ribosomal protein L30 [Ensembl]. Ribosomal protein... 0.05 OrthoFinder
AAL22285 STM3422, rpmD 50S ribosomal subunit protein L30 [Ensembl]. Ribosomal... 0.11 OrthoFinder
AGT22260 N559_0452 ribosomal protein L30 [Ensembl]. ferredoxin-like fold... 0.09 OrthoFinder
AKP15140 rpmD, WX61_01086 50S ribosomal protein L30 [Ensembl]. Ribosomal protein... 0.04 OrthoFinder
CCP43466 rpmD, Rv0722 50S ribosomal protein L30 RpmD [Ensembl]. Ribosomal... 0.07 OrthoFinder
CPD14133 rpmD, ERS093114_02140 50S ribosomal protein L30 [Ensembl]. Ribosomal protein... 0.13 OrthoFinder
CRO74278 rpmD 50S ribosomal protein L30 [Ensembl]. Ribosomal protein... 0.04 OrthoFinder
EDJ91374 rpmD, CGSHi22421_04703 50S ribosomal protein L30 [Ensembl]. Ribosomal protein... 0.05 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0004071 aspartate-ammonia ligase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0015833 peptide transport IEP Enrichment
MF GO:0016603 glutaminyl-peptide cyclotransferase activity IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0042886 amide transport IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
InterPro domains Description Start Stop
IPR016082 Ribosomal_L30_ferredoxin-like 4 54
No external refs found!