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  5. CCG27424

CCG27424 (RimM)


Aliases : RimM

Description : 16S rRNA processing protein RimM [Ensembl]. PRC-barrel domain, RimM N-terminal domain [Interproscan].


Gene families : OG_02_0000750 (OrthoFinder) Phylogenetic Tree(s): OG0000750_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCG27424
Cluster HCAA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AAK99490 spr0686, rimM 16S rRNA processing protein RimM [Ensembl]. PRC-barrel... 0.04 OrthoFinder
CPC35876 rimM, ERS093114_00185 16S rRNA processing protein [Ensembl]. PRC-barrel... 0.04 OrthoFinder
CRO16836 rimM Ribosome maturation factor RimM [Ensembl]. PRC-barrel... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP Enrichment
MF GO:0004371 glycerone kinase activity IEP Enrichment
MF GO:0004486 methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity IEP Enrichment
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006541 glutamine metabolic process IEP Enrichment
BP GO:0006542 glutamine biosynthetic process IEP Enrichment
BP GO:0008652 cellular amino acid biosynthetic process IEP Enrichment
MF GO:0008887 glycerate kinase activity IEP Enrichment
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
BP GO:0031388 organic acid phosphorylation IEP Enrichment
BP GO:0046394 carboxylic acid biosynthetic process IEP Enrichment
BP GO:1901607 alpha-amino acid biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR002676 RimM_N 6 89
IPR027275 PRC-brl_dom 96 167
No external refs found!