CCP43936 (pks3, Rv1180)


Aliases : pks3, Rv1180

Description : Probable polyketide beta-ketoacyl synthase Pks3 [Ensembl]. Beta-ketoacyl synthase, Ketoacyl-synthetase C-terminal extension [Interproscan].


Gene families : OG_02_0000310 (OrthoFinder) Phylogenetic Tree(s): OG0000310_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCP43936
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
CCP43136 pks6, Rv0405 Probable membrane bound polyketide synthase Pks6... 0.06 OrthoFinder
CCP44291 pks5, Rv1527c Probable polyketide synthase Pks5 [Ensembl]. KR domain,... 0.05 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000097 sulfur amino acid biosynthetic process IEP Enrichment
MF GO:0004601 peroxidase activity IEP Enrichment
BP GO:0006555 methionine metabolic process IEP Enrichment
BP GO:0006979 response to oxidative stress IEP Enrichment
MF GO:0008705 methionine synthase activity IEP Enrichment
BP GO:0009086 methionine biosynthetic process IEP Enrichment
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Enrichment
BP GO:0016311 dephosphorylation IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
MF GO:0031419 cobalamin binding IEP Enrichment
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Enrichment
MF GO:0042084 5-methyltetrahydrofolate-dependent methyltransferase activity IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
MF GO:0050380 undecaprenyl-diphosphatase activity IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
InterPro domains Description Start Stop
IPR014031 Ketoacyl_synth_C 251 364
IPR032821 PKS_assoc 375 462
IPR014030 Ketoacyl_synth_N 1 243
UniProtKB L0T5X5