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CCP44393 (polA, Rv1629)


Aliases : polA, Rv1629

Description : Probable DNA polymerase I PolA [Ensembl]. 5'-3' exonuclease, DNA polymerase family A [Interproscan].


Gene families : OG_02_0000357 (OrthoFinder) Phylogenetic Tree(s): OG0000357_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCP44393
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AAK98836 spr0032, polA DNA polymerase I [Ensembl]. 5'-3' exonuclease, DNA... 0.02 OrthoFinder
AHY39592 CJ8421_01675 DNA polymerase I [Ensembl]. 5'-3' exonuclease, 3'-5'... 0.02 OrthoFinder
CPC75542 ypcP, ERS093114_01206 DNA polymerase I [Ensembl]. 5'-3' exonuclease [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0003887 DNA-directed DNA polymerase activity IEA Interproscan
BP GO:0006260 DNA replication IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000150 DNA strand exchange activity IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP Enrichment
MF GO:0004180 carboxypeptidase activity IEP Enrichment
MF GO:0004185 serine-type carboxypeptidase activity IEP Enrichment
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Enrichment
MF GO:0004832 valine-tRNA ligase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0006438 valyl-tRNA aminoacylation IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Enrichment
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
InterPro domains Description Start Stop
IPR020046 5-3_exonucl_a-hlix_arch_N 1 167
IPR001098 DNA-dir_DNA_pol_A_palm_dom 510 883
IPR020045 DNA_polI_H3TH 169 262
No external refs found!