- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : uspB, Rv2317
Description : Probable sugar-transport integral membrane protein ABC transporter UspB [Ensembl]. Binding-protein-dependent transport system inner membrane component [Interproscan].
Gene families : OG_02_0000063 (OrthoFinder) Phylogenetic Tree(s): OG0000063_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: CCP45104 | |
| Cluster | HCCA: Cluster_2 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AAC76476 | ugpE, b3451 | sn-glycerol-3-phosphate ABC transporter permease... | 0.02 | OrthoFinder | |
| AAL00336 | spr1532, ABC-MSP | ABC transporter membrane-spanning permease-sugar... | 0.02 | OrthoFinder | |
| AAL22415 | STM3555, ugpE | sn-glycerol 3-phosphate transport protein [Ensembl].... | 0.02 | OrthoFinder | |
| AAL23051 | STM4227, malG | maltose transport protein [Ensembl].... | 0.02 | OrthoFinder | |
| AEA94459 | OG1RF_11772 | sugar ABC superfamily ATP binding cassette transporter,... | 0.03 | OrthoFinder | |
| AGT22158 | N559_0343 | glycerol-3-phosphate transporter membrane protein... | 0.02 | OrthoFinder | |
| CCL18973 | BN171_2790002 | ABC-type transport system, sugar-family permease... | 0.02 | OrthoFinder | |
| CCL19863 | BN171_3570012 | ABC-type transport system, sugar-family permease... | 0.03 | OrthoFinder | |
| CRP18444 | araQ | L-arabinose transport system permease protein AraQ... | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0016020 | membrane | IEA | Interproscan |
| BP | GO:0055085 | transmembrane transport | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006777 | Mo-molybdopterin cofactor biosynthetic process | IEP | Enrichment |
| BP | GO:0006865 | amino acid transport | IEP | Enrichment |
| BP | GO:0015849 | organic acid transport | IEP | Enrichment |
| CC | GO:0019008 | molybdopterin synthase complex | IEP | Enrichment |
| BP | GO:0019720 | Mo-molybdopterin cofactor metabolic process | IEP | Enrichment |
| BP | GO:0043545 | molybdopterin cofactor metabolic process | IEP | Enrichment |
| BP | GO:0051189 | prosthetic group metabolic process | IEP | Enrichment |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | Enrichment |
| MF | GO:0051540 | metal cluster binding | IEP | Enrichment |
| BP | GO:0071705 | nitrogen compound transport | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000515 | MetI-like | 85 | 267 |
| UniProtKB | L7N652 |