CCP46402 (Rv3579c)


Aliases : Rv3579c

Description : Possible tRNA/rRNA methyltransferase [Ensembl]. SpoU rRNA Methylase family, RNA 2'-O ribose methyltransferase substrate binding [Interproscan].


Gene families : OG_02_0000169 (OrthoFinder) Phylogenetic Tree(s): OG0000169_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCP46402
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
ADK87112 MPNE_0411 RNA methyltransferase, TrmH family, group 3 [Ensembl].... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
BP GO:0006396 RNA processing IEA Interproscan
MF GO:0008168 methyltransferase activity IEA Interproscan
MF GO:0008173 RNA methyltransferase activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
MF GO:0003937 IMP cyclohydrolase activity IEP Enrichment
MF GO:0004643 phosphoribosylaminoimidazolecarboxamide formyltransferase activity IEP Enrichment
MF GO:0004826 phenylalanine-tRNA ligase activity IEP Enrichment
BP GO:0006012 galactose metabolic process IEP Enrichment
BP GO:0006432 phenylalanyl-tRNA aminoacylation IEP Enrichment
MF GO:0008108 UDP-glucose:hexose-1-phosphate uridylyltransferase activity IEP Enrichment
MF GO:0008509 anion transmembrane transporter activity IEP Enrichment
MF GO:0008939 nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009273 peptidoglycan-based cell wall biogenesis IEP Enrichment
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Enrichment
MF GO:0015105 arsenite transmembrane transporter activity IEP Enrichment
BP GO:0015700 arsenite transport IEP Enrichment
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016763 pentosyltransferase activity IEP Enrichment
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
MF GO:0019238 cyclohydrolase activity IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
BP GO:0042546 cell wall biogenesis IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0051304 chromosome separation IEP Enrichment
MF GO:0052636 arabinosyltransferase activity IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
MF GO:0070569 uridylyltransferase activity IEP Enrichment
BP GO:0071554 cell wall organization or biogenesis IEP Enrichment
BP GO:0071766 Actinobacterium-type cell wall biogenesis IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR013123 SpoU_subst-bd 70 144
IPR001537 SpoU_MeTrfase 161 300
No external refs found!