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Description : putative transcriptional regulator [Ensembl]. Prophage CP4-57 regulatory protein (AlpA) [Interproscan].
Gene families : OG_02_0001015 (OrthoFinder) Phylogenetic Tree(s): OG0001015_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: CRN75577 | |
| Cluster | HCCA: Cluster_46 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AGT25767 | N559_4142, AlpA | phage transcriptional regulator, AlpA [Ensembl]. | 0.03 | OrthoFinder | |
| AGT26194 | N559_4595, AlpA | phage transcriptional regulator, AlpA [Ensembl]. | 0.06 | OrthoFinder | |
| CRN94540 | No alias | putative transcriptional regulator [Ensembl]. Prophage... | 0.23 | OrthoFinder | |
| CRO71853 | No alias | putative transcriptional regulator [Ensembl]. Prophage... | 0.08 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003697 | single-stranded DNA binding | IEP | Enrichment |
| MF | GO:0005539 | glycosaminoglycan binding | IEP | Enrichment |
| CC | GO:0005694 | chromosome | IEP | Enrichment |
| BP | GO:0006814 | sodium ion transport | IEP | Enrichment |
| BP | GO:0006885 | regulation of pH | IEP | Enrichment |
| MF | GO:0008998 | ribonucleoside-triphosphate reductase activity | IEP | Enrichment |
| MF | GO:0016725 | oxidoreductase activity, acting on CH or CH2 groups | IEP | Enrichment |
| MF | GO:0016728 | oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor | IEP | Enrichment |
| MF | GO:0042834 | peptidoglycan binding | IEP | Enrichment |
| BP | GO:0048878 | chemical homeostasis | IEP | Enrichment |
| BP | GO:0050801 | ion homeostasis | IEP | Enrichment |
| BP | GO:0055067 | monovalent inorganic cation homeostasis | IEP | Enrichment |
| BP | GO:0055080 | cation homeostasis | IEP | Enrichment |
| BP | GO:0098771 | inorganic ion homeostasis | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR010260 | AlpA | 12 | 62 |
| Locus_tag | PAERUG_E11_London_26_VIM_2_06_13_00454 |